Array Programming with NumPy
arXiv:2006.10256 · doi:10.1038/s41586-020-2649-2
Abstract
Array programming provides a powerful, compact, expressive syntax for accessing, manipulating, and operating on data in vectors, matrices, and higher-dimensional arrays. NumPy is the primary array programming library for the Python language. It plays an essential role in research analysis pipelines in fields as diverse as physics, chemistry, astronomy, geoscience, biology, psychology, material science, engineering, finance, and economics. For example, in astronomy, NumPy was an important part of the software stack used in the discovery of gravitational waves and the first imaging of a black hole. Here we show how a few fundamental array concepts lead to a simple and powerful programming paradigm for organizing, exploring, and analyzing scientific data. NumPy is the foundation upon which the entire scientific Python universe is constructed. It is so pervasive that several projects, targeting audiences with specialized needs, have developed their own NumPy-like interfaces and array objects. Because of its central position in the ecosystem, NumPy increasingly plays the role of an interoperability layer between these new array computation libraries.
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- Empirical quantification of predictive uncertainty due to model discrepancy by training with an ensemble of experimental designs: an application to ion channel kinetics
- Discovery of PSR J0523-7125 as a Circularly Polarized Variable Radio Source in the Large Magellanic Cloud
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- High-frequency wave power observed in the solar chromosphere with IBIS and ALMA
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- GLoW: novel methods for wave-optics phenomena in gravitational lensing
- The new magnetar SGR J1830-0645 in outburst
- A kinematic study of central compact objects and their host supernova remnants
- Constraints on Cosmological Parameters with a Sample of Type Ia Supernovae from JWST
- Introducing the AIDA-TNG project: galaxy formation in alternative dark matter models
- An Elusive Population of Massive Disk Galaxies Hosting Double-lobed Radio-loud AGNs
- Data Leakage and Evaluation Issues in Micro-Expression Analysis
- Reading the tea leaves in the - and - diagrams: dry and gaseous mergers with remnant angular momentum
- Stellar Spins in the Pleiades, Praesepe, and M35 Open Clusters
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- New Observations of the Eclipsing Binary System NY Vir and its Candidate Circumbinary Planets
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- Many Roads Lead to Lithium: Formation Pathways For Lithium-Rich Red Giants
- Potential of the Julia programming language for high energy physics computing
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- Beyond the Local Volume. I. Surface Densities of Ultracool Dwarfs in Deep HST/WFC3 Parallel Fields
- Comparative Analysis of TRGBs (CATs) from Unsupervised, Multi-Halo-Field Measurements: Contrast is Key
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- Preparing to discover the unknown with Rubin LSST -- I: Time domain
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- A jolt to the system: ram pressure on low-mass galaxies in simulations of the Local Group
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- A Lack of Variability Between Repeated Spitzer Phase Curves of WASP-43b
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- Dynamics of baryon ejection in magnetar giant flares: implications for radio afterglows, r-process nucleosynthesis, and fast radio bursts
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- Revealing the Field Sub-subgiant Population Using a Catalog of Active Giant Stars and Gaia EDR3
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- oMEGACat II -- Photometry and proper motions for 1.4 million stars in Omega Centauri and its rotation in the plane of the sky
- Hydrodynamics and survivability during post-main-sequence planetary engulfment
- Analysis of a Tau Neutrino Origin for the Near-Horizon Air Shower Events Observed by the Fourth Flight of the Antarctic Impulsive Transient Antenna (ANITA)
- Strategies for optimal sky subtraction in the low surface brightness regime
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- Using the Sun to Measure the Primary Beam Response of the Canadian Hydrogen Intensity Mapping Experiment
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- The GRAVITY young stellar object survey -- XI. Probing the inner disk and magnetospheric accretion region of CI Tau
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- Revisiting Radial Velocity Measurements of the K2-18 System with the Line-by-Line Framework
- Zwicky Transient Facility and Globular Clusters: The Period-Luminosity and Period-Wesenheit Relations for Type II Cepheids
- A new method to measure the spectra of transiting exoplanet atmospheres using multi-object spectroscopy
- Applications of Machine Learning to Detecting Fast Neutrino Flavor Instabilities in Core-Collapse Supernova and Neutron Star Merger Models
- Stellar Characterization and Radius Inflation of Hyades M Dwarf Stars From the APOGEE Survey
- Flashlights: An Off-Caustic Lensed Star at Redshift = 1.26 in Abell 370
- Impact of climate change on site characteristics of eight major astronomical observatories using high-resolution global climate projections until 2050
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- The large-scale 21-cm power spectrum from reionization
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- Optimization of the resonator-induced phase gate for superconducting qubits
- Mixed Modes and Asteroseismic Surface Effects: I. Analytic Treatment
- Gaussian RBF Centered Kernel Alignment (CKA) in the Large Bandwidth Limit
- Stellar Chromospheric Activity Database of Solar-like Stars Based on the LAMOST Low-Resolution Spectroscopic Survey
- The Influence of 10 Unique Chemical Elements in Shaping the Distribution of Kepler Planets
- Efficient Gravitational Wave Template Bank Generation with Differentiable Waveforms
- The Alcock-Paczyński effect from Lyman- forest correlations: Analysis validation with synthetic data
- Mapping the "invisible" circumgalactic medium around a z 4.5 radio galaxy with MUSE
- Astraeus VI: Hierarchical assembly of AGN and their large-scale effect during the Epoch of Reionization
- Placing LOFAR-detected quasars in CIV emission space: implications for winds, jets and star formation
- The hot Neptune WASP-166 b with ESPRESSO III: A blue-shifted tentative water signal constrains the presence of clouds
- Induced earthquake source parameters, attenuation, and site effects from waveform envelopes in the Fennoscandian Shield
- Probing the large scale structure using gravitational-wave observations of binary black holes
- The Obscured Fraction of Quasars at Cosmic Noon
- BNNpriors: A library for Bayesian neural network inference with different prior distributions
- Discovery of a red backsplash galaxy candidate near M81
- One never walks alone: the effect of the perturber population on subhalo measurements in strong gravitational lenses
- TOI-4010: A System of Three Large Short-Period Planets With a Massive Long-Period Companion
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- Where Outflows Meet Inflows: Gas Kinematics in SSA22 Lyman- Blob 2 Decoded by Advanced Radiative Transfer Modelling
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- Discovery of correlated evolution in solar noise storm source parameters: Insights on magnetic field dynamics during a microflare
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- The ASAS-SN Bright Supernova Catalog -- V. 2018-2020
- High Resolution HST Imaging Survey of Local Star-Forming Galaxies I: Spatially-Resolved Obscured Star Formation with H and Paschen- Recombination Lines
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- The Variable Detection of Atmospheric Escape around the young, Hot Neptune AU Mic b
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- Exploring the possibility of Peter Pan discs across stellar mass
- Rotation and Abundances of the Benchmark Brown Dwarf HD 33632 Ab from Keck/KPIC High-resolution Spectroscopy
- Determination of small-scale magnetic fields on Sun-like stars in the near-infrared using CRIRES
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- Characterising coronal turbulence using snapshot imaging of radio bursts in 80-200 MHz
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- MIGHTEE-HI: deep spectral line observations of the COSMOS field
- Kinematic analysis of the super-extended HI disk of the nearby spiral galaxy M83
- INSPIRE: INvestigating Stellar Population In RElics IV. The Initial Mass Function slope in relics
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- Exploring the interaction between the MW and LMC with a large sample of blue horizontal branch stars from the DESI survey
- Evidence of an age gradient along the line of sight in the nuclear stellar disc of the Milky Way
- Search range in experimental quantum annealing
- Machine Learning Automated Approach for Enormous Synchrotron X-Ray Diffraction Data Interpretation
- A CHEOPS White Dwarf Transit Search
- The C-Band All-Sky Survey (C-BASS): Template Fitting of Diffuse Galactic Microwave Emission in the Northern Sky
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- Towards an optimal extraction of cosmological parameters from galaxy cluster surveys using convolutional neural networks
- ARCHITECTS I: Impact of subgrid physics on the simulated properties of the circumgalactic medium
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- On the Frobenius number of certain numerical semigroups
- Probing Heavily Obscured AGN in Major Galaxy Mergers Using the mm-X-ray Correlation
- Halo Photometry and Asteroseismology for 98 of the Brightest Stars Observed by TESS
- The LOFAR sub-arcsecond view of the high-redshift radio relic in PSZ2G091.83+26.11
- Discovery of a runaway star likely ejected by a Type Iax Supernova
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- The ALPINE-CRISTAL-JWST Survey: Gas-phase abundance gradients of main sequence star-forming galaxies and their kinematics at
- Vertical Structure of Protoplanetary Disks in Scattered Light: A large sample analysis
- Ashes of FIRE: Modeling Dust Grain Size Evolution in the Local Group with FIRE
- MUSE-DARK-II: 3D morpho-kinematic modelling of lensed galaxies. Tully-Fisher relation of star-forming galaxies
- The CAVITY project. The spatially resolved SFR of galaxies in voids
- The Star Formation Factory revisited I. The impact of metallicity on collapsing star-forming clouds
- Hyperaccreting Neutron Stars inside Massive Envelopes: The Implausibility of Thorne-Żytkow Objects
- Improving INTEGRAL/SPI data analysis of GRBs
- The Hierarchical Structure of Galactic Haloes: Generalised N-Dimensional Clustering with CluSTAR-ND
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- Icy Volatile Enhancements in Evolving Protoplanetary Disks
- Discovery of the First Octupole Pulsation Mode in a delta Scuti Star: A Stationary l = 3 Sectoral Mode
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- Analytic Inverse Design of Temporal Metamaterials via Space-Time Duality
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- HETDEX Public Data Release 1: Source Catalog 2 and Data Cubes from ~90 sq deg of Integral-Field Optical Spectroscopy
- Direct detection of cool molecular gas in a star-forming galaxy at
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- The Tale of a Hungry Subgiant and Its Brown Dwarf: Interior Radiative Damping Dominates the Tidal Evolution of TOI-5882
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- Hadronic Processes, Plasma Evolution and Neutrino Emission in Magnetic Towers of Neutron-Star Merger Remnants
- KRONOS I: The m JWST Transmission Spectrum of the 23 Myr V1298 Tau c
- The NANOGrav 15 yr Data Set: Customized Chromatic Noise Models
- Euclid: Discovery of 31 new quasars at
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- Direct Imaging Discovery of Giant Exoplanet Pictoris d: A Decade-Long Game of Hide-and-Seek
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- Mid-infrared Variability-based AGN Selection using the Multi-epoch Photometric Data from WISE
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- exoALMA XX: Tomographic Detection of Embedded Planets in Protoplanetary Disks
- The Environments of Star-Forming Galaxies Detected in the SFACT Survey: Do Mergers and Interactions Drive the Star Formation?
- Stellar age determination using deep neural networks: Isochrone ages for 1.3 million stars, based on BaSTI, MIST, PARSEC, Dartmouth and SYCLIST evolutionary grids
- Centaur 2013 VZ70: Debris from Saturn's irregular moon population?
- Mock Observations of Multiple Stellar Populations in Tidal Streams of Palomar 5 for the Chinese Space Station Survey Telescope
- Direct Images of CO2 Absorption in the Atmosphere of a Super-Jupiter: Enhanced Metallicity Suggestive of Formation in a Disk
- Learn&Drop: Fast Learning of CNNs based on Layer Dropping
- The dark and featureless surface of rocky exoplanet LHS 3844 b from JWST mid-infrared spectroscopy
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- The dark matter wake of a galactic bar revealed by multichannel Singular Spectral Analysis
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- The SNIa Runaway LP 398-9: Detection of Circumstellar Material and Surface Rotation
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- A one-parameter two-zone leptonic model for the blazar sequence
- Meta-learners for few-shot weakly-supervised optic disc and cup segmentation on fundus images
- Evidence of Possible Spectral Variability in the Patroclus-Menoetius Binary System
- CoSeNet: A Novel Approach for Optimal Segmentation of Correlation Matrices
- Scalable Stellar Parameter Inference Using Python-based LASP: From CPU Optimization to GPU Acceleration
- Covertly Active Comet (139359) 2001 ME1
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- Periodic 6.7 GHz maser emission in G353.273+0.641: First candidate for a pulsating high-mass protostar
- A framework for modeling the evolution of young stellar objects
- Photometric Mapping of Carbonaceous/Siliceous Dust and Water Ice in the ISM with JWST: Applications to the Dense Sightlines
- Assessing robustness and bias in 1D retrievals of 3D Global Circulation Models at high spectral resolution: a WASP-76 b simulation case study in emission
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- Galaxy And Mass Assembly (GAMA): From filaments to voids, how extreme environment affects gas metallicity and SFR in galaxies
- Rotation Curves in z~1-2 Star-Forming Disks: Comparison of Dark Matter Fractions and Disk Properties for Different Fitting Methods
- Silicate Sundogs: Probing the Effects of Grain Directionality in Exoplanet Observations
- New Metrics for Identifying Variables and Transients in Large Astronomical Surveys
- First Results from WINERED: Detection of Emission Lines from Neutral Iron and a Combined Set of Trace Species on the Dayside of WASP-189 b
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- PyNoetic: A modular python framework for no-code development of EEG brain-computer interfaces
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- Chemodynamics of BoötesI with : Revised Velocity Gradient, Dark Matter Density, and Galactic Chemical Evolution Constraints
- NIHAO-LG: The uniqueness of Local Group dwarf galaxies
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