Stochastic thermodynamics under coarse-graining
arXiv:1112.5410 · doi:10.1103/PhysRevE.85.041125
Abstract
A general formulation of stochastic thermodynamics is presented for open systems exchanging energy and particles with multiple reservoirs. By introducing a partition in terms of "macrostates" (e.g. sets of "microstates"), the consequence on the thermodynamic description of the system is studied in detail. When microstates within macrostates rapidly thermalize, the entire structure of the microscopic theory is recovered at the macrostate level. This is not the case when these microstates remain out of equilibrium leading to additional contributions to the entropy balance. Some of our results are illustrated for a model of two coupled quantum dots.
12 pages, 3 figures
References in corpus (10)
- Efficiency at maximum power: An analytically solvable model for stochastic heat engines
- Fluctuation theorems for stochastic dynamics
- Measurement of Stochastic Entropy Production
- Fluctuation relations and coarse-graining
- Fluctuation relations for a driven Brownian particle
- Fluctuation theorems for capacitively coupled electronic currents
- Coarse graining of master equations with fast and slow states
- The "footprints'' of irreversibility
- Irreversible Thermodynamics in Multiscale Stochastic Dynamical Systems
- A low-dimensional detector model for full counting statistics: Trajectories, Back-Action, and Fidelity
Cited by in corpus (243)
- Stochastic thermodynamics, fluctuation theorems, and molecular machines
- Broken detailed balance and non-equilibrium dynamics in living systems
- Quantum and Information Thermodynamics: A Unifying Framework based on Repeated Interactions
- Thermodynamics of a physical model implementing a Maxwell demon
- Nonequilibrium Thermodynamics of Chemical Reaction Networks: Wisdom from Stochastic Thermodynamics
- Thermodynamics with continuous information flow
- Stochastic thermodynamics of bipartite systems: transfer entropy inequalities and a Maxwell's demon interpretation
- Broken detailed balance and entropy production in the human brain
- Quantum Thermodynamics: A Nonequilibrium Green's Functions Approach
- Efficiency of cellular information processing
- The thermodynamic cost of driving quantum systems by their boundaries
- Inferring dissipation from current fluctuations
- Stochastic thermodynamics of computation
- Hidden entropy production and work fluctuations in an ideal active gas
- Fluctuation Theorem for Partially-masked Nonequilibrium Dynamics
- Irreversible thermodynamics of open chemical networks I: Emergent cycles and broken conservation laws
- Non-adiabatic quantized charge pumping with tunable-barrier quantum dots: a review of current progress
- On the nature of heat in strongly coupled open quantum systems
- Distribution of Entropy Production in a Single-Electron Box
- Improved bounds on entropy production in living systems
- Non-Markovianity and negative entropy production rates
- Estimating entropy production from waiting time distributions
- Statistics of Infima and Stopping Times of Entropy Production and Applications to Active Molecular Processes
- Stochastic thermodynamics in the strong coupling regime: An unambiguous approach based on coarse-graining
- Effective thermodynamics for a marginal observer
- Multiple-scale stochastic processes: decimation, averaging and beyond
- Stochastic approach to equilibrium and nonequilibrium thermodynamics
- Stochastic thermodynamics with information reservoirs
- Non-equilibrium brain dynamics as a signature of consciousness
- Hierarchical Bounds on Entropy Production Inferred from Partial Information
- Heat, temperature and Clausius inequality in a model for active brownian particles
- Sensory capacity: an information theoretical measure of the performance of a sensor
- Finite-time erasing of information stored in fermionic bits
- Fluctuation Theorem for Hidden Entropy Production
- Collective power: Minimal model for thermodynamics of nonequilibrium phase transitions
- Conservation Laws shape Dissipation
- Multipartite information flow for multiple Maxwell demons
- Fluctuation-dissipation relations far from equilibrium
- Universal Bound on Energy Cost of Bit Reset in Finite Time
- Above and Beyond the Landauer Bound: Thermodynamics of Modularity
- Emergent memory and kinetic hysteresis in strongly driven networks
- Nonequilibrium sensing and its analogy to kinetic proofreading
- Exact Coarse Graining Preserves Entropy Production out of Equilibrium
- Thermodynamically Consistent Coarse Graining of Biocatalysts beyond Michaelis--Menten
- Learning entropy production via neural networks
- Stochastic thermodynamics of rapidly driven systems
- Stochastic thermodynamics of Langevin systems under time-delayed feedback control: I. Second-law-like inequalities
- Entropy Production in Mesoscopic Stochastic Thermodynamics: Nonequilibrium Kinetic Cycles Driven by Chemical Potentials, Temperatures, and Mechanical Forces
- Estimating time-dependent entropy production from non-equilibrium trajectories
- Speed Limits for Macroscopic Transitions
- A Decomposition of Irreversible Diffusion Processes Without Detailed Balance
- Entropy production in systems with unidirectional transitions
- Phase transition in thermodynamically consistent biochemical oscillators
- Entropy Production in Quantum Brownian Motion
- Heat flow due to time-delayed feedback
- Work statistics in stochastically driven systems
- Time-resolved statistics of snippets as general framework for model-free entropy estimators
- An electronic Maxwell demon in the coherent strong-coupling regime
- Irreversibility in dynamical phases and transitions
- Nonequilibrium Thermodynamic Formalism of Nonlinear Chemical Reaction Systems with Waage-Guldberg's Law of Mass Action
- Entropy production of nano systems with timescale separation
- Effective fluctuation and response theory
- Thermodynamics of emergent structure in active matter
- Universality in driven Potts models
- Rate of mutual information between coarse-grained non-Markovian variables
- Macroscopic Stochastic Thermodynamics
- Milestoning estimators of dissipation in systems observed at a coarse resolution: When ignorance is truly bliss
- Conservation laws and symmetries in stochastic thermodynamics
- Quantum Thermodynamics with Degenerate Eigenstate Coherences
- Circuit Theory for Chemical Reaction Networks
- Mutual Entropy-Production and Sensing in Bipartite Systems
- Coarse-grained entropy production with multiple reservoirs: unraveling the role of time-scales and detailed balance in biology-inspired systems
- Effective rates from thermodynamically consistent coarse-graining of models for molecular motors with probe particles
- Second law for active heat engines
- On the energetics of information exchange
- Detailed Fluctuation Theorems: A Unifying Perspective
- Nonconvexity of the relative entropy for Markov dynamics: A Fisher information approach
- Scaling of Energy Dissipation in Nonequilibrium Reaction Networks
- Tightest bound on hidden entropy production from partially observed dynamics
- Quantum Martingale Theory and Entropy Production
- Measurability of nonequilibrium thermodynamics in terms of the Hamiltonian of mean force
- Violation of Local Detailed Balance Despite a Clear Time-Scale Separation
- Simulating a Chemically-Fueled Molecular Motor with Nonequilibrium Molecular Dynamics
- Negative differential response in chemical reactions
- Energy and information flows in autonomous systems
- Roadmap on Quantum Thermodynamics
- Entropy production for coarse-grained dynamics
- The Zeroth Law of Thermodynamics and Volume-Preserving Conservative Dynamics with Equilibrium Stochastic Damping
- Stochastic thermodynamics of self-oscillations: the electron shuttle
- Carnot process with a single particle
- Thermodynamic cost for precision of general counting observables
- Stochastic thermodynamics of all-to-all interacting many-body systems
- Exact correspondence between Renyi entropy flows and physical flows
- Fluctuations of Apparent Entropy Production in Networks with Hidden Slow Degrees of Freedom
- On the stochastic thermodynamics of fractional Brownian motion
- Local detailed balance across scales: from diffusions to jump processes and beyond
- Modulated two-level system : Exact work statistics
- Hidden entropy production by fast variables
- Cycle representatives for the coarse-graining of systems driven into a non-equilibrium steady state
- Effective fluctuation theorems for electron transport in a double quantum dot coupled to a quantum point contact
- Stochastic thermodynamics of fluctuating density fields: Non-equilibrium free energy differences under coarse-graining
- Emergent second law for non-equilibrium steady states
- Double quantum dot coupled to a quantum point contact: A stochastic thermodynamics approach
- Fine-structured large deviations and the fluctuation theorem: Molecular motors and beyond
- Model simplification and loss of irreversibility
- On the work distribution in quasi-static processes
- Inferring Subsystem Efficiencies in Bipartite Molecular Machines
- Non-invasive estimation of dissipation from non-equilibrium fluctuations in chemical reactions
- Performance boost of a collective qutrit refrigerator
- Stochastic thermodynamics with arbitrary interventions
- Fluctuating Entropy Production on the Coarse-Grained Level: Inference and Localization of Irreversibility
- A space-time tradeoff for implementing a function with master equation dynamics
- Effective Hamiltonians and Lagrangians for conditioned Markov processes at large volume
- Fluctuation relations for driven coupled classical two-level systems
- Stochastic thermodynamics and entropy production of chemical reaction systems
- Differential Landauer's principle
- Efficiency gain and bidirectional operation of quantum engines with decoupled internal levels
- Thermodynamic bounds on spectral perturbations, with applications to oscillations and relaxation dynamics
- Broken detailed balance and entropy production in directed networks
- Entropy production in Master Equations and Fokker-Planck Equations: facing the coarse-graining and recovering the information loss
- Entropy production of a Brownian ellipsoid in the overdamped limit
- Balancing Error and Dissipation in Computing
- General theory for localizing the where and when of entropy production meets single-molecule experiments
- Collective couplings: rectification and supertransmittance
- Energy versus information based estimations of dissipation using a pair of magnetic colloidal particles
- Optimal time estimation and the clock uncertainty relation for stochastic processes
- Stochastic thermodynamics based on incomplete information: Generalized Jarzynski equality with measurement errors with or without feedback
- Quantifying the validity and breakdown of the overdamped approximation in stochastic thermodynamics: Theory and experiment
- Effective thermodynamics of two interacting underdamped Brownian particles
- Dynamical activity universally bounds precision of response in Markovian nonequilibrium systems
- Effective Entropy Production and Thermodynamic Uncertainty Relation of Active Brownian Particles
- Hidden slow degrees of freedom and fluctuation theorems: an analytically solvable model
- Linear Stochastic Thermodynamics
- Nonequilibrium thermodynamics and information theory: Basic concepts and relaxing dynamics
- Perspective: Time irreversibility in systems observed at coarse resolution
- Optimal power extraction from active particles with hidden states
- Rényi entropy flows from quantum heat engines
- Scaling of Entropy Production under Coarse Graining in Active Disordered Media
- Thermodynamic bounds on equilibrium fluctuations of a global or local order parameter
- Stochastic thermodynamics of opinion dynamics
- Information-driven transitions in projections of underdamped dynamics
- Fluctuations of cell geometry and their non-equilibrium thermodynamics in living epithelial tissue
- Non-Markovian Momentum Computing: Universal and Efficient
- Martingale structure for general thermodynamic functionals of diffusion processes under second-order averaging
- Relation between topology and heat currents in multilevel absorption machines
- Heat distribution in open quantum systems with maximum entropy production
- Free-energy transduction within autonomous systems
- Stochastic approach to entropy production in chemical chaos
- A Minimal Model for Carnot Efficiency at Maximum Power
- Modeling of biomolecular machines in non-equilibrium steady states
- On the emergence of memory in equilibrium versus non-equilibrium systems
- Maxwell's demon across the quantum-to-classical transition
- Thermodynamic inference based on coarse-grained data or noisy measurements
- Beat of a current
- The derivation of Markov processes that violate detailed balance
- Diffusion of interacting particles in discrete geometries: equilibrium and dynamical properties
- Strong Coupling Thermodynamics and Stochastic Thermodynamics from the Unifying Perspective of Time-Scale Separation
- Scaling behavior of non-equilibrium measures in internally driven elastic assemblies
- An estimator of entropy production for partially accessible Markov networks based on the observation of blurred transitions
- Entropy production in the mesoscopic-leads formulation of quantum thermodynamics
- Fisher information of Markovian decay modes - Nonequilibrium equivalence principle, dynamical phase transitions and coarse graining
- Conditional entropy and Landauer principle
- On entropy production in nonequilibrium systems
- Microscopic theory for the time irreversibility and the entropy production
- Entropy estimation for partially accessible Markov networks based on imperfect observations: Role of finite resolution and finite statistics
- Sequential measurements and entropy
- Inverse linear versus exponential scaling of work penalty in finite-time bit reset
- Information Arbitrage in Bipartite Heat Engines
- Estimate of entropy generation rate can spatiotemporally resolve the active nature of cell flickering
- Brownian particles in periodic potentials: coarse-graining versus fine structure
- A linear nonequilibrium thermodynamics approach to optimization of thermoelectric devices
- Information Thermodynamics of the Transition-Path Ensemble
- Partial entropy production in heat transport
- Quantifying dissipation in flocking dynamics: When tracking internal states matters
- Entropy production for complex Langevin equations
- Entropy-generated power and its efficiency
- Non-reciprocal hidden degrees of freedom: A unifying perspective on memory, feedback, and activity
- Thermodynamic inference in partially accessible Markov networks: A unifying perspective from transition-based waiting time distributions
- Dissipation in small systems: A Landau-Zener approach
- Invariance of Steady State Thermodynamics between Different Scales of Description
- Sterically Driven Current Reversal in a Model Molecular Motor
- Interlinked GTPase cascades provide a motif for both robust switches and oscillators
- Entropy production in a photovoltaic cell
- Inferring kinetics and entropy production from observable transitions in partially accessible, periodically driven Markov networks
- Dynamics of Micro and Nanoscale Systems in the Weak-Memory Regime
- A Thermodynamic Non-Linear Response Relation
- Thermodynamics of majority-logic decoding in information erasure
- Certifying quantum enhancements in thermal machines beyond the Thermodynamic Uncertainty Relation
- Unattainability of Carnot efficiency in thermal motors: Coarse-graining and entropy production of Feynman-Smoluchowski ratchet
- A framework for sequential measurements and general Jarzynski equations
- Decomposing Thermodynamic Dissipation of Linear Langevin Systems via Oscillatory Modes and Its Application to Neural Dynamics
- Dissipation at limited resolutions: Power law and detection of hidden dissipative scales
- Boltzmann stochastic thermodynamics
- Stochastic thermodynamics of a tagged particle within a harmonic chain
- Homeostatic and Adaptive Energetics: Nonequilibrium Fluctuations Beyond Detailed Balance in Voltage-Gated Ion Channels
- Entropy production for partially observed harmonic systems
- Thermodynamic role of main reaction pathway and multi-body information flow in membrane transport
- Information Dimension of Stochastic Processes on Networks: Relating Entropy Production to Spectral Properties
- Free energy for non-equilibrium quasi-stationary states
- Speed limit, dissipation bound and dissipation-time trade-off in thermal relaxation processes
- Adsorption and desorption in confined geometries: a discrete hopping model
- Inferring entropy production in many-body systems using nonequilibrium maximum entropy
- Attaining entropy production and dissipation maps from Brownian movies via neural networks
- Dissipation in Hydrodynamics from Micro- to Macroscale: Wisdom from Boltzmann and Stochastic Thermodynamics
- Nonlinear Stochastic Dynamics of Complex Systems, III: Noneqilibrium Thermodynamics of Self-Replication Kinetics
- Coercivity Landscape Characterizes Dynamic Hysteresis
- Minimal thermodynamic cost of communication
- H-theorem at negative temperature: the random exchange model with bounds
- Universal Ideal Behavior and Macroscopic Work Relation of Linear Irreversible Stochastic Thermodynamics
- Dynamics of micro and nanoscale systems in the weak-memory regime: A mathematical framework beyond the Markov approximation
- First and Second Laws of Information Processing by Nonequilibrium Dynamical States
- Inferring nonequilibrium thermodynamics from tilted equilibrium using information-geometric Legendre transform
- Coarse-grained Second Order Response Theory
- Foundations of Stochastic Thermodynamics
- From observed transitions to hidden paths in Markov networks
- Compensating random transition-detection blackouts in Markov networks
- Approximating microswimmer dynamics by active Brownian motion: Energetics and efficiency
- Purely quantum memory in closed systems observed via imperfect measurements
- How small can Maxwell's demon be? -- Lessons from autonomous electronic feedback models
- Counting observables in stochastic excursions
- Irreversibility in scalar active turbulence: The role of topological defects
- Work, entropy production, and thermodynamics of information under protocol constraints
- Coarse Graining Photo-Isomerization Reactions: Thermodynamic Consistency and Implications for Molecular Ratchets
- Framework for fluctuating times and counting observables in stochastic excursions
- Entropy production for asymmetric diffusion of particles
- Tightening the thermodynamic uncertainty relations with null-entropy events: What we learn when nothing happens
- Coarse-graining nonequilibrium diffusions with Markov chains
- Experimentally accessible measurement of irreversibility in stochastic systems by categorizing single-molecule displacements
- Characteristic oscillations in frequency-resolved heat dissipation of linear time-delayed Langevin systems: Approach from the violation of the fluctuation-response relation
- Prior-predictive value from fast-growth simulations: Error analysis and bias estimation
- Weak-Memory Dynamics in Discrete Time
- Optimizing Energetic cost of Uncertainty in a Driven System With and Without Feedback
- Coarse-grained quantum thermodynamics: Observation-dependent quantities, observation-independent laws
- Information-thermodynamic characterization of stochastic Boolean networks
- Microcanonical ensemble out of equilibrium
- Information loss and entropy production during dissipative processes in a macroscopic system kicked out of the equilibrium
- Excess and loss of entropy production for different levels of coarse-graining
- Patterns that persist: Heritable information in stochastic dynamics
- Information thermodynamics of cellular ion pumps
- Extracting energy from non-equilibrium fluctuations without using information
- Quantum dynamics of a bosonic mode and a two-level system interacting with several reservoirs
- Entangled criticality and irreversibility in random Markov dynamics
- Stochastic Thermodynamics, Reversible Dynamical Systems and Information Theory