An estimator of entropy production for partially accessible Markov networks based on the observation of blurred transitions
arXiv:2312.08246 · doi:10.1103/PhysRevE.109.054109
Abstract
A central task in stochastic thermodynamics is the estimation of entropy production for partially accessible Markov networks. We establish an effective transition-based description for such networks with transitions that are not distinguishable and therefore blurred for an external observer. We demonstrate that, in contrast to a description based on fully resolved transitions, this effective description is typically non-Markovian at any point in time. Starting from an information-theoretic bound, we derive an operationally accessible entropy estimator for this observation scenario. We illustrate the operational relevance and the quality of this entropy estimator with a numerical analysis of various representative examples.
References in corpus (18)
- Thermodynamic uncertainty relation for biomolecular processes
- Statistical Mechanics of Interacting Run-and-Tumble Bacteria
- Stochastic thermodynamics of chemical reaction networks
- An allosteric model of KaiC phosphorylation
- Fluctuation Theorem for Partially-masked Nonequilibrium Dynamics
- Lower bounds on dissipation upon coarse graining
- Entropy production of active particles and for particles in active baths
- Multiple-scale stochastic processes: decimation, averaging and beyond
- Fluctuation relations and coarse-graining
- Entropy production and coarse-graining in Markov processes
- Hierarchical Bounds on Entropy Production Inferred from Partial Information
- Time-resolved statistics of snippets as general framework for model-free entropy estimators
- Violation of Local Detailed Balance Despite a Clear Time-Scale Separation
- Operationally Accessible Uncertainty Relations for Thermodynamically Consistent Semi-Markov Processes
- Coarse graining of biochemical systems described by discrete stochastic dynamics
- Fluctuation relations for driven coupled classical two-level systems
- Nonequilibrium fluctuations of chemical reaction networks at criticality: The Schlögl model as paradigmatic case
- Waiting time distributions in hybrid models of motor-bead assays: A concept and tool for inference
Cited by in corpus (6)
- Entropy estimation for partially accessible Markov networks based on imperfect observations: Role of finite resolution and finite statistics
- Dissipation at limited resolutions: Power law and detection of hidden dissipative scales
- Thermodynamic bounds and symmetries in first-passage problems of fluctuating currents
- Compensating random transition-detection blackouts in Markov networks
- A pedestrian's approach to large deviations in semi-Markov processes with an application to entropy production
- Counting observables in stochastic excursions