2.5k citations
- Harvard UniversityUS12 papers
- Institute for Advanced StudyUS6 papers
- Centre National de la Recherche ScientifiqueFR4 papers
- Laboratoire de Physique ThéoriqueFR3 papers
- University of PennsylvaniaUS3 papers
- Princeton UniversityUS2 papers
- University of WaterlooCA2 papers
- Cancer Genetics (United States)US1 paper
- Cancer Research UKGB1 paper
- Cancer Research UK Cambridge CenterGB1 paper
- Columbia UniversityUS1 paper
- General Department of Preventive MedicineVN1 paper
6 papers · 1 filter
Population stratification using a statistical model on hypergraphs
Alexei Vazquez
Population stratification is a problem encountered in several areas of biology and public health. We tackle this problem by mapping a population and its elements attributes into a…
Unexpected relaxation dynamics of a self-avoiding polymer in cylindrical confinement
A. Arnold, B. Bozorgui, D. Frenkel +2
We report extensive simulations of the relaxation dynamics of a self-avoiding polymer confined inside a cylindrical pore. In particular, we concentrate on examining how confinement…
Genome landscapes and bacteriophage codon usage
Julius B. Lucks, David R. Nelson, Grzegorz Kudla +1
Across all kingdoms of biological life, protein-coding genes exhibit unequal usage of synonmous codons. Although alternative theories abound, translational selection has been accep…
On a Smale Theorem and Nonhomogeneous Equilibria in Cooperative Systems
German A. Enciso
A standard result by Smale states that n dimensional strongly cooperative dynamical systems can have arbitrary dynamics when restricted to unordered invariant hyperspaces. In this…
Robust protein-protein interactions in crowded cellular environments
Eric Deeds, orr Ashenberg, Jaline Gerardine +1
The capacity of proteins to interact specifically with one another underlies our conceptual understanding of how living systems function. Systems-level study of specificity in prot…
Dependency Parsing with Dynamic Bayesian Network
Virginia Savova, Leonid Peshkin
Exact parsing with finite state automata is deemed inappropriate because of the unbounded non-locality languages overwhelmingly exhibit. We propose a way to structure the parsing t…