811 citations · 7.3k across the 89 of their papers we have counts for
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Combining mutation and recombination statistics to infer clonal families in antibody repertoires
Natanael Spisak, Gabriel Athènes, Thomas Dupic +2
B-cell repertoires are characterized by a diverse set of receptors of distinct specificities generated through two processes of somatic diversification: V(D)J recombination and som…
A small-correlation expansion to quantify information in noisy sensory systems
Gabriel Mahuas, Olivier Marre, Thierry Mora +1
Neural networks encode information through their collective spiking activity in response to external stimuli. This population response is noisy and strongly correlated, with comple…
Generalized Glauber dynamics for inference in biology
Xiaowen Chen, Maciej Winiarski, Alicja Puscian +3
Large interacting systems in biology often exhibit emergent dynamics, such as coexistence of multiple time scales, manifested by fat tails in the distribution of waiting times. Whi…
Inspecting the interaction between HIV and the immune system through genetic turnover
Andrea Mazzolini, Thierry Mora, Aleksandra M Walczak
Chronic infections of the human immunodeficiency virus (HIV) create a very complex co-evolutionary process, where the virus tries to escape the continuously adapting host immune sy…
From evolution to folding of repeat proteins
Ezequiel A. Galpern, Jacopo Marchi, Thierry Mora +2
Repeat proteins are made with tandem copies of similar amino acid stretches that fold into elongated architectures. Due to their symmetry, these proteins constitute excellent model…