811 citations · 7.3k across the 89 of their papers we have counts for
3 papers · 1 filter
Statistical inference of the generation probability of T-cell receptors from sequence repertoires
Anand Murugan, Thierry Mora, Aleksandra M. Walczak +1
Stochastic rearrangement of germline DNA by VDJ recombination is at the origin of immune system diversity. This process is implemented via a series of stochastic molecular events i…
The simplest maximum entropy model for collective behavior in a neural network
Gasper Tkacik, Olivier Marre, Thierry Mora +3
Recent work emphasizes that the maximum entropy principle provides a bridge between statistical mechanics models for collective behavior in neural networks and experiments on netwo…
Transition path sampling algorithm for discrete many-body systems
Thierry Mora, Aleksandra M. Walczak, Francesco Zamponi
We propose a new Monte Carlo method for efficiently sampling trajectories with fixed initial and final conditions in a system with discrete degrees of freedom. The method can be ap…