742 citations
- Wellcome TrustGB18 papers
- University of CambridgeGB11 papers
- Wellcome Sanger InstituteGB11 papers
- Centre National de la Recherche ScientifiqueFR10 papers
- Harvard UniversityUS9 papers
- SIB Swiss Institute of BioinformaticsCH9 papers
- European Molecular Biology LaboratoryDE7 papers
- Lawrence Berkeley National LaboratoryUS7 papers
- Stanford UniversityUS7 papers
- University of ManchesterGB7 papers
- Broad InstituteUS6 papers
- University of HelsinkiFI6 papers
75 papers
Chemical classification program synthesis using generative artificial intelligence
Christopher J. Mungall, Adnan Malik, Daniel R. Korn +4
Accurately classifying chemical structures is essential for cheminformatics and bioinformatics, including tasks such as identifying bioactive compounds of interest, screening molec…
Open and Sustainable AI: challenges, opportunities and the road ahead in the life sciences (October 2025 -- Version 2)
Gavin Farrell, Eleni Adamidi, Rafael Andrade Buono +27
Artificial intelligence (AI) has recently seen transformative breakthroughs in the life sciences, expanding possibilities for researchers to interpret biological information at an…
SBMLtoOdin and Menelmacar: Interactive visualisation of systems biology models for expert and non-expert audiences
Leonie J. Lorenz, Antoine Andréoletti, Tung V. N. Nguyen +4
Motivation: Computational models in biology can increase our understanding of biological systems, be used to answer research questions, and make predictions. Accessibility and reus…
Making Software FAIR: A machine-assisted workflow for the research software lifecycle
Petr Knoth, Laurent Romary, Patrice Lopez +7
A key issue hindering discoverability, attribution and reusability of open research software is that its existence often remains hidden within the manuscript of research papers. Fo…
Machine learning for cerebral blood vessels' malformations
Irem Topal, Alexander Cherevko, Yuri Bugay +5
Cerebral aneurysms and arteriovenous malformations are life-threatening hemodynamic pathologies of the brain. While surgical intervention is often essential to prevent fatal outcom…
The need to implement FAIR principles in biomolecular simulations
Rommie Amaro, Johan Åqvist, Ivet Bahar +125
This letter illustrates the opinion of the molecular dynamics (MD) community on the need to adopt a new FAIR paradigm for the use of molecular simulations. It highlights the necess…