21 citations · 27 across the 13 of their papers we have counts for
3 papers · 1 filter
Energetics of Protein-DNA Interactions
Jason E Donald, William W Chen, Eugene I Shakhnovich
Protein-DNA interactions are vital for many processes in living cells, especially transcriptional regulation and DNA modification. To further our understanding of these important p…
All-atom ab initio folding of a diverse set of proteins
Jae Shick Yang, William W. Chen, Jeffrey Skolnick +1
Natural proteins fold to a unique, thermodynamically dominant state. Modeling of the folding process and prediction of the native fold of proteins are two major unsolved problems i…
Thermodynamics of the Hairpin Ribozyme from All-Atom Simulations
Lucas G. Nivon, Eugene I. Shakhnovich
The structure of the self-cleaving hairpin ribozyme is well characterized, and its folding has been examined in bulk and by single-molecule fluorescence, establishing the importanc…