Constructing A Flexible Likelihood Function For Spectroscopic Inference
arXiv:1412.5177 · doi:10.1088/0004-637X/812/2/128
Abstract
We present a modular, extensible likelihood framework for spectroscopic inference based on synthetic model spectra. The subtraction of an imperfect model from a continuously sampled spectrum introduces covariance between adjacent datapoints (pixels) into the residual spectrum. For the high signal-to-noise data with large spectral range that is commonly employed in stellar astrophysics, that covariant structure can lead to dramatically underestimated parameter uncertainties (and, in some cases, biases). We construct a likelihood function that accounts for the structure of the covariance matrix, utilizing the machinery of Gaussian process kernels. This framework specifically address the common problem of mismatches in model spectral line strengths (with respect to data) due to intrinsic model imperfections (e.g., in the atomic/molecular databases or opacity prescriptions) by developing a novel local covariance kernel formalism that identifies and self-consistently downweights pathological spectral line "outliers." By fitting many spectra in a hierarchical manner, these local kernels provide a mechanism to learn about and build data-driven corrections to synthetic spectral libraries. An open-source software implementation of this approach is available at http://iancze.github.io/Starfish, including a sophisticated probabilistic scheme for spectral interpolation when using model libraries that are sparsely sampled in the stellar parameters. We demonstrate some salient features of the framework by fitting the high resolution -band spectrum of WASP-14, an F5 dwarf with a transiting exoplanet, and the moderate resolution -band spectrum of Gliese 51, an M5 field dwarf.
Accepted to ApJ. Incorporated referees' comments. New figures 1, 8, 10, 12, and 14. Supplemental website: http://iancze.github.io/Starfish/
References in corpus (14)
- Modules for Experiments in Stellar Astrophysics (MESA)
- The Occurrence and Mass Distribution of Close-in Super-Earths, Neptunes, and Jupiters
- Three regimes of extrasolar planets inferred from host star metallicities
- A New Planet Around an M Dwarf: Revealing a Correlation Between Exoplanets and Stellar Mass
- Exoplanet population inference and the abundance of Earth analogs from noisy, incomplete catalogs
- Data analysis recipes: Fitting a model to data
- Type Ia Supernova Light Curve Inference: Hierarchical Bayesian Analysis in the Near Infrared
- Precise time-series photometry for the Kepler-2.0 mission
- Cosmic Calibration: Constraints from the Matter Power Spectrum and the Cosmic Microwave Background
- WASP-14b: 7.3 Mj transiting planet in an eccentric orbit
- Radial Velocity Observations and Light Curve Noise Modeling Confirm That Kepler-91b is a Giant Planet Orbiting a Giant Star
- IN-SYNC I: Homogeneous Stellar Parameters from High Resolution APOGEE Spectra for Thousands of Pre-main Sequence Star
- Accurate Gravities of F, G, and K stars from High Resolution Spectra Without External Constraints
- Estimating Stellar Parameters from Spectra using a Hierarchical Bayesian Approach
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