output
20062025
most citedIdentification of direct residue contacts in protein-protein interaction by message passing

1.1k citations

25 papers

cs.DB2025

The NIAID Discovery Portal: A Unified Search Engine for Infectious and Immune-Mediated Disease Datasets

Ginger Tsueng, Emily Bullen, Candice Czech +18

The NIAID Data Ecosystem Discovery Portal (https://data.niaid.nih.gov) provides a unified search interface for over 4 million datasets relevant to infectious and immune-mediated di…

q-bio.QM2025★ 2 cited

Hillclimb-Causal Inference: A Data-Driven Approach to Identify Causal Pathways Among Parental Behaviors, Genetic Risk, and Externalizing Behaviors in Children

Mengman Wei, Qian Peng

Motivation: Externalizing behaviors in children, such as aggression, hyperactivity, and defiance, are influenced by complex interplays between genetic predispositions and environme…

cs.NI2025★ 4 cited

Channel, Mode and Power Optimization for non-Orthogonal D2D Communications: a Hybrid Approach

Federico Librino, Giorgio Quer

The increasing traffic demand in cellular networks has recently led to the investigation of new strategies to save precious resources like spectrum and energy. Direct device-to-dev…

q-bio.BM2023★ 36 cited

Community recommendations on cryoEM data archiving and validation

Gerard J. Kleywegt, Paul D. Adams, Sarah J. Butcher +44

In January 2020, a workshop was held at EMBL-EBI (Hinxton, UK) to discuss data requirements for deposition and validation of cryoEM structures, with a focus on single-particle anal…

q-bio.OT2022★ 179 cited

Initial recommendations for performing, benchmarking, and reporting single-cell proteomics experiments

Laurent Gatto, Ruedi Aebersold, Juergen Cox +18

Analyzing proteins from single cells by tandem mass spectrometry (MS) has become technically feasible. While such analysis has the potential to accurately quantify thousands of pro…

q-bio.BM2020★ 329 cited

The FRET-based structural dynamics challenge -- community contributions to consistent and open science practices

Eitan Lerner, Benjamin Ambrose, Anders Barth +23

Single-molecule Förster resonance energy transfer (smFRET) has become a mainstream technique for probing biomolecular structural dynamics. The rapid and wide adoption of the techni…