activity
20032021
most citedHow accurate are polymer models in the analysis of Forster resonance energy transfer experiments on proteins?

100 citations · 292 across the 14 of their papers we have counts for

collaborators

14 papers

cond-mat.soft2021

A mathematical model for phenotypic heterogeneity in breast cancer with implications for therapeutic strategies

Xin Li, D. Thirumalai

Inevitably, almost all cancer patients develop resistance to targeted therapy. Intratumor heterogeneity (ITH) is a major cause of drug resistance. Mathematical models that explain…

physics.bio-ph2020★ 18 cited

Self-generated persistent random forces drive phase separation in growing tumors

Sumit Sinha, D. Thirumalai

A single solid tumor, composed of nearly identical cells, exhibits heterogeneous dynamics. Cells dynamics in the core is glass-like whereas those in the periphery undergo diffusive…

cond-mat.soft2020★ 52 cited

From Hi-C Contact Map to Three-dimensional Organization of Interphase Human Chromosomes

Guang Shi, D. Thirumalai

The probability of two loci, separated by a certain genome length, being in contact can be inferred using the Chromosome Conformation Capture (3C) method and related Hi-C experimen…

physics.bio-ph2020★ 1 cited

Far from equilibrium dynamics of tracer particles embedded in a growing multicellular spheroid

Himadri S. Samanta, Sumit Sinha, D. Thirumalai

By embedding inert tracer particles (TPs) in a growing multicellular spheroid the local stresses on the cancer cells (CCs) can be measured. In order for this technique to be effect…

cond-mat.soft2019★ 9 cited

Fragile-to-Strong Crossover, growing length scales, and dynamic heterogeneity in Wigner Glasses

Hyun Woo Cho, Mauro L. Mugnai, T. R. Kirkpatrick +1

Colloidal particles, which are ubiquitous, have become ideal testing grounds for the structural glass transition (SGT) theories. In these systems glassy behavior is manifested as t…

cond-mat.stat-mech2018★ 10 cited

On the origin of super-diffusive behavior in a class of non-equilibrium systems

Himadri S. Samanta, D. Thirumalai

Experiments and simulations have established that dynamics in a class of living and abiotic systems that are far from equilibrium exhibit super diffusive behavior at long times, wh…