most citedSpeed-Up of DNA Melting Algorithm with Complete Nearest Neighbor Properties

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q-bio.BM2008★ 3 cited

Segmentation of DNA sequences into twostate regions and melting fork regions

Eivind Tøstesen, Geir Kjetil Sandve, Fang Liu +1

The accurate prediction and characterization of DNA melting domains by computational tools could facilitate a broad range of biological applications. However, no algorithm for melt…

q-bio.BM2004★ 26 cited

Speed-Up of DNA Melting Algorithm with Complete Nearest Neighbor Properties

E. Tostesen, F. Liu, T. -K. Jenssen +1

We describe a faster and more accurate algorithm for computing the statistical mechanics of DNA denaturation according to the Poland-Scheraga type. Nearest neighbor thermodynamics…