26 citations
2 papers
q-bio.BM2004★ 13 cited
Partly melted DNA conformations obtained with a probability peak finding method
E. Tostesen
Peaks in the probabilities of loops or bubbles, helical segments, and unzipping ends in melting DNA are found in this article using a peak finding method that maps the hierarchical…
q-bio.BM2004★ 26 cited
Speed-Up of DNA Melting Algorithm with Complete Nearest Neighbor Properties
E. Tostesen, F. Liu, T. -K. Jenssen +1
We describe a faster and more accurate algorithm for computing the statistical mechanics of DNA denaturation according to the Poland-Scheraga type. Nearest neighbor thermodynamics…