output
20042026
most citedCell Detection with Star-convex Polygons

1.7k citations

Showing 2023Show all

12 papers · 1 filter

cs.SI2023★ 2 cited

iGEM: a model system for team science and innovation

Marc Santolini, Leo Blondel, Megan J. Palmer +5

Teams are a primary source of innovation in science and technology. Rather than examining the lone genius, scholarly and policy attention has shifted to understanding how team inte…

cond-mat.soft2023★ 1 cited

Cut it out: Out-of-plane stresses in cell sheet folding of Volvox embryos

Pierre A. Haas, Stephanie S. M. H. Höhn

The folding of cellular monolayers pervades embryonic development and disease. It results from stresses out of the plane of the tissue, often caused by cell shape changes including…

physics.bio-ph2023★ 4 cited

Active shape control by plants in dynamic environments

Hadrien Oliveri, Derek E. Moulton, Heather A. Harrington +1

Plants are a paradigm for active shape control in response to stimuli. For instance, it is well-known that a tilted plant will eventually straighten vertically, demonstrating the i…

cs.CE2023★ 6 cited

A high-order fully Lagrangian particle level-set method for dynamic surfaces

Lennart J. Schulze, Sachin K. T. Veettill, Ivo F. Sbalzarini

We present a fully Lagrangian particle level-set method based on high-order polynomial regression. This enables closest-point redistancing without requiring a regular Cartesian mes…

cs.MS2023★ 11 cited

An open-source pipeline for solving continuous reaction-diffusion models in image-based geometries of porous media

Justina Stark, Ivo F. Sbalzarini

We present a versatile open-source pipeline for simulating inhomogeneous reaction-diffusion processes in highly resolved, image-based geometries of porous media with reactive bound…

cs.FL2023

On the Computational Power of Particle Methods

Johannes Pahlke, Ivo F. Sbalzarini

We investigate the computational power of particle methods, a well-established class of algorit hms with applications in scientific computing and computer simulation. The computati…

physics.flu-dyn2023★ 7 cited

Theoretical model of confined thermoviscous flows for artificial cytoplasmic streaming

Weida Liao, Elena Erben, Moritz Kreysing +1

Recent experiments in cell biology have probed the impact of artificially-induced intracellular flows in the spatiotemporal organisation of cells and organisms. In these experiment…

physics.flu-dyn2023★ 6 cited

Entropically damped artificial compressibility for the discretization corrected particle strength exchange method in incompressible fluid mechanics

Abhinav Singh, Ivo F. Sbalzarini, Anas Obeidat

We present a consistent mesh-free numerical scheme for solving the incompressible Navier-Stokes equations. Our method is based on entropically damped artificial compressibility for…

physics.comp-ph2023★ 56 cited

Adaptive weighting of Bayesian physics informed neural networks for multitask and multiscale forward and inverse problems

Sarah Perez, Suryanarayana Maddu, Ivo F. Sbalzarini +1

In this paper, we present a novel methodology for automatic adaptive weighting of Bayesian Physics-Informed Neural Networks (BPINNs), and we demonstrate that this makes it possible…

q-bio.OT2023★ 87 cited

Community-developed checklists for publishing images and image analysis

Christopher Schmied, Michael Nelson, Sergiy Avilov +51

Images document scientific discoveries and are prevalent in modern biomedical research. Microscopy imaging in particular is currently undergoing rapid technological advancements. H…

math.AG2023★ 1 cited

Identifiability and singular locus of secant varieties to spinor varieties

Vincenzo Galgano

In this work we analyze the -structure of the secant variety of lines to a Spinor variety minimally embedded in its spin representation. I…

cond-mat.soft2023★ 14 cited

Spontaneous flow instabilities of active polar fluids in three dimensions

Abhinav Singh, Quentin Vagne, Frank Jülicher +1

Active polar fluids exhibit spontaneous flow when sufficient active stress is generated by internal molecular mechanisms. This is also referred to as an active Fréedericksz transit…