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20042026
most citedCell Detection with Star-convex Polygons

1.7k citations

Showing 2013Show all

8 papers · 1 filter

stat.CO2013★ 1 cited

Adaptive Distributed Resampling Algorithm with Non-Proportional Allocation

Ömer Demirel, Ihor Smal, Wiro Niessen +2

The distributed resampling algorithm with proportional allocation (RNA) is key to implementing particle filtering applications on parallel computer systems. We extend the original…

stat.CO2013

Piecewise Constant Sequential Importance Sampling for Fast Particle Filtering

Ömer Demirel, Ihor Smal, Wiro J. Niessen +2

Particle filters are key algorithms for object tracking under non-linear, non-Gaussian dynamics. The high computational cost of particle filters, however, hampers their applicabili…

cs.DC2013★ 3 cited

PPF - A Parallel Particle Filtering Library

Ömer Demirel, Ihor Smal, Wiro Niessen +2

We present the parallel particle filtering (PPF) software library, which enables hybrid shared-memory/distributed-memory parallelization of particle filtering (PF) algorithms combi…

q-bio.QM2013★ 285 cited

Efficient Bayesian-based Multi-View Deconvolution

Stephan Preibisch, Fernando Amat, Evangelia Stamataki +4

Light sheet fluorescence microscopy is able to image large specimen with high resolution by imaging the sam- ples from multiple angles. Multi-view deconvolution can significantly i…

cs.DC2013★ 3 cited

Balancing indivisible real-valued loads in arbitrary networks

Omer Demirel, Ivo F. Sbalzarini

In parallel computing, a problem is divided into a set of smaller tasks that are distributed across multiple processing elements. Balancing the load of the processing elements is k…

q-bio.CB2013★ 149 cited

Cell body rocking is a dominant mechanism for flagellar synchronization in a swimming alga

Veikko Geyer, Frank Jülicher, Jonathon Howard +1

The unicellular green algae Chlamydomonas swims with two flagella, which can synchronize their beat. Synchronized beating is required to swim both fast and straight. A long-standin…

q-bio.PE2013★ 175 cited

An Adaptive Threshold in Mammalian Neocortical Evolution

Eric Lewitus, Iva Kelava, Alex T. Kalinka +2

Expansion of the neocortex is a hallmark of human evolution. However, it remains an open question what adaptive mechanisms facilitated its expansion. Here we show, using gyrencepha…

q-bio.QM2013★ 388 cited

OpenSPIM - an open access platform for light sheet microscopy

Peter Pitrone, Johannes Schindelin, Luke Stuyvenberg +5

Light sheet microscopy promises to revolutionize developmental biology by enabling live in toto imaging of entire embryos with minimal phototoxicity. We present detailed instructio…