output
20132026
most citedColonoscopy 3D Video Dataset with Paired Depth from 2D-3D Registration

110 citations

23 papers

cond-mat.soft2026

Biocompatible Microscale DNA Hydrogels with Programmable Swelling and Sequence-Specific Dissolution

Corinna Torabi, Takayuki Suzuki, Emily Helm +4

Stimulus-responsive DNA-hydrogels with swelling capabilities are a promising class of materials for biomedical applications such as drug delivery and biosensing. However, translati…

eess.IV2025

SurgiSR4K: A High-Resolution Endoscopic Video Dataset for Robotic-Assisted Minimally Invasive Procedures

Fengyi Jiang, Xiaorui Zhang, Lingbo Jin +11

High-resolution imaging is crucial for enhancing visual clarity and enabling precise computer-assisted guidance in minimally invasive surgery (MIS). Despite the increasing adoption…

eess.IV2025

Multi-contrast laser endoscopy for in vivo gastrointestinal imaging

Taylor L. Bobrow, Mayank Golhar, Suchapa Arayakarnkul +3

White light endoscopy is the clinical gold standard for detecting diseases in the gastrointestinal tract. Most applications involve identifying visual abnormalities in tissue color…

cs.RO2025★ 2 cited

Deep Learning-Enhanced Robotic Subretinal Injection with Real-Time Retinal Motion Compensation

Tianle Wu, Mojtaba Esfandiari, Peiyao Zhang +3

Subretinal injection is a critical procedure for delivering therapeutic agents to treat retinal diseases such as age-related macular degeneration (AMD). However, retinal motion cau…

cs.RO2025

An Extended Generalized Prandtl-Ishlinskii Hysteresis Model for I2RIS Robot

Yiyao Yue, Mojtaba Esfandiari, Pengyuan Du +5

Retinal surgery requires extreme precision due to constrained anatomical spaces in the human retina. To assist surgeons achieve this level of accuracy, the Improved Integrated Robo…

cs.RO2025★ 1 cited

Model Predictive Path Integral Control of I2RIS Robot Using RBF Identifier and Extended Kalman Filter

Mojtaba Esfandiari, Pengyuan Du, Haochen Wei +4

Modeling and controlling cable-driven snake robots is a challenging problem due to nonlinear mechanical properties such as hysteresis, variable stiffness, and unknown friction betw…

cs.RO2024★ 1 cited

An Image-Guided Robotic System for Transcranial Magnetic Stimulation: System Development and Experimental Evaluation

Yihao Liu, Jiaming Zhang, Letian Ai +6

Transcranial magnetic stimulation (TMS) is a noninvasive medical procedure that can modulate brain activity, and it is widely used in neuroscience and neurology research. Compared…

cs.RO2023★ 29 cited

Robotic Navigation Autonomy for Subretinal Injection via Intelligent Real-Time Virtual iOCT Volume Slicing

Shervin Dehghani, Michael Sommersperger, Peiyao Zhang +6

In the last decade, various robotic platforms have been introduced that could support delicate retinal surgeries. Concurrently, to provide semantic understanding of the surgical ar…

cs.CV2022★ 110 cited

Colonoscopy 3D Video Dataset with Paired Depth from 2D-3D Registration

Taylor L. Bobrow, Mayank Golhar, Rohan Vijayan +3

Screening colonoscopy is an important clinical application for several 3D computer vision techniques, including depth estimation, surface reconstruction, and missing region detecti…

eess.IV2022★ 16 cited

GAN Inversion for Data Augmentation to Improve Colonoscopy Lesion Classification

Mayank Golhar, Taylor L. Bobrow, Saowanee Ngamruengphong +1

A major challenge in applying deep learning to medical imaging is the paucity of annotated data. This study demonstrates that synthetic colonoscopy images generated by Generative A…

cs.AI2021★ 78 cited

Advancing COVID-19 Diagnosis with Privacy-Preserving Collaboration in Artificial Intelligence

Xiang Bai, Hanchen Wang, Liya Ma +43

Artificial intelligence (AI) provides a promising substitution for streamlining COVID-19 diagnoses. However, concerns surrounding security and trustworthiness impede the collection…

cs.RO2020★ 1 cited

Spotlight-based 3D Instrument Guidance for Retinal Surgery

Mingchuan Zhou, Jiahao Wu, Ali Ebrahimi +7

Retinal surgery is a complex activity that can be challenging for a surgeon to perform effectively and safely. Image guided robot-assisted surgery is one of the promising solutions…

cs.RO2020★ 1 cited

Autonomously Navigating a Surgical Tool Inside the Eye by Learning from Demonstration

Ji Woong Kim, Changyan He, Muller Urias +4

A fundamental challenge in retinal surgery is safely navigating a surgical tool to a desired goal position on the retinal surface while avoiding damage to surrounding tissues, a pr…

cs.CV2020★ 24 cited

Improving colonoscopy lesion classification using semi-supervised deep learning

Mayank Golhar, Taylor L. Bobrow, MirMilad Pourmousavi Khoshknab +3

While data-driven approaches excel at many image analysis tasks, the performance of these approaches is often limited by a shortage of annotated data available for training. Recent…

cs.LG2020★ 19 cited

A Physiology-Driven Computational Model for Post-Cardiac Arrest Outcome Prediction

Han B. Kim, Hieu Nguyen, Qingchu Jin +9

Patients resuscitated from cardiac arrest (CA) face a high risk of neurological disability and death, however pragmatic methods are lacking for accurate and reliable prognosticatio…

cs.CV2019★ 81 cited

Automatic Annotation of Hip Anatomy in Fluoroscopy for Robust and Efficient 2D/3D Registration

Robert Grupp, Mathias Unberath, Cong Gao +7

Fluoroscopy is the standard imaging modality used to guide hip surgery and is therefore a natural sensor for computer-assisted navigation. In order to efficiently solve the complex…

cs.CV2019★ 4 cited

Fast and Automatic Periacetabular Osteotomy Fragment Pose Estimation Using Intraoperatively Implanted Fiducials and Single-View Fluoroscopy

Robert Grupp, Ryan Murphy, Rachel Hegeman +6

Accurate and consistent mental interpretation of fluoroscopy to determine the position and orientation of acetabular bone fragments in 3D space is difficult. We propose a computer…

cs.CV2019★ 2 cited

Smooth Extrapolation of Unknown Anatomy via Statistical Shape Models

Robert Grupp, Hsin-Hong Chiang, Yoshito Otake +4

Several methods to perform extrapolation of unknown anatomy were evaluated. The primary application is to enhance surgical procedures that may use partial medical images or medical…

cs.RO2019★ 22 cited

Hybrid Robot-assisted Frameworks for Endomicroscopy Scanning in Retinal Surgeries

Zhaoshuo Li, Mahya Shahbazi, Niravkumar Patel +9

High-resolution real-time intraocular imaging of retina at the cellular level is very challenging due to the vulnerable and confined space within the eyeball as well as the limited…

q-bio.NC2015★ 6 cited

Predicting single-neuron activity in locally connected networks

Feraz Azhar, William S. Anderson

The characterization of coordinated activity in neuronal populations has received renewed interest in the light of advancing experimental techniques which allow recordings from mul…

q-bio.NC2014

Sensitivity to Timing and Order in Human Visual Cortex

Jedediah M. Singer, Joseph R. Madsen, William S. Anderson +1

Visual recognition takes a small fraction of a second and relies on the cascade of signals along the ventral visual stream. Given the rapid path through multiple processing steps b…

q-bio.PE2013★ 2 cited

Genome-wide scan of 29,141 African Americans finds no evidence of selection since admixture

Gaurav Bhatia, Arti Tandon, Melinda C. Aldrich +44

We scanned through the genomes of 29,141 African Americans, searching for loci where the average proportion of African ancestry deviates significantly from the genome-wide average.…

q-bio.TO2013

The Cancer Diaspora: Metastasis beyond the seed and soil hypothesis

Kenneth J. Pienta, Bruce Robertson, Donald S. Coffey +1

Do cancer cells escape their confinement of their original habitat in the primary tumor or are they forced out by ecological changes in their home niche? Describing metastasis in t…