811 citations · 6.8k across the 93 of their papers we have counts for
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A stochastic spectral analysis of transcriptional regulatory cascades
Aleksandra M. Walczak, Andrew Mugler, Chris H. Wiggins
The past decade has seen great advances in our understanding of the role of noise in gene regulation and the physical limits to signaling in biological networks. Here we introduce…
Gene-gene cooperativity in small networks
Aleksandra M. Walczak, Peter G. Wolynes
We show how to construct a reduced description of interacting genes in noisy, small regulatory networks using coupled binary "spin" variables. Treating both the protein number and…
Constructing explicit magnetic analogies for the dynamics of glass forming liquids
Jacob D. Stevenson, Aleksandra M. Walczak, Randall W. Hall +1
By defining a spatially varying replica overlap parameter for a supercooled liquid referenced to an ensemble of fiducial liquid state configurations we explicitly construct a const…