44 citations · 157 across the 58 of their papers we have counts for
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Disentangling Progress in Medical Image Registration: Beyond Trend-Driven Architectures towards Domain-Specific Strategies
Bailiang Jian, Jiazhen Pan, Rohit Jena +5
Medical image registration drives quantitative analysis across organs, modalities, and patient populations. Recent deep learning methods often combine low-level "trend-driven" comp…
MM-DINOv2: Adapting Foundation Models for Multi-Modal Medical Image Analysis
Daniel Scholz, Ayhan Can Erdur, Viktoria Ehm +4
Vision foundation models like DINOv2 demonstrate remarkable potential in medical imaging despite their origin in natural image domains. However, their design inherently works best…
Contrastive Anatomy-Contrast Disentanglement: A Domain-General MRI Harmonization Method
Daniel Scholz, Ayhan Can Erdur, Robbie Holland +4
Magnetic resonance imaging (MRI) is an invaluable tool for clinical and research applications. Yet, variations in scanners and acquisition parameters cause inconsistencies in image…
Rule-based Key-Point Extraction for MR-Guided Biomechanical Digital Twins of the Spine
Robert Graf, Tanja Lerchl, Kati Nispel +7
Digital twins offer a powerful framework for subject-specific simulation and clinical decision support, yet their development often hinges on accurate, individualized anatomical mo…
MedFuncta: A Unified Framework for Learning Efficient Medical Neural Fields
Paul Friedrich, Florentin Bieder, Julian McGinnis +3
Research in medical imaging primarily focuses on discrete data representations that poorly scale with grid resolution and fail to capture the often continuous nature of the underly…
TimeFlow: Temporal Conditioning for Longitudinal Brain MRI Registration and Aging Analysis
Bailiang Jian, Jiazhen Pan, Yitong Li +5
Longitudinal brain analysis is essential for understanding healthy aging and identifying pathological deviations. Longitudinal registration of sequential brain MRI underpins such a…
Towards a vision foundation model for comprehensive assessment of Cardiac MRI
Athira J Jacob, Indraneel Borgohain, Teodora Chitiboi +3
Cardiac magnetic resonance imaging (CMR), considered the gold standard for noninvasive cardiac assessment, is a diverse and complex modality requiring a wide variety of image proce…
Classification, Regression and Segmentation directly from k-Space in Cardiac MRI
Ruochen Li, Jiazhen Pan, Youxiang Zhu +2
Cardiac Magnetic Resonance Imaging (CMR) is the gold standard for diagnosing cardiovascular diseases. Clinical diagnoses predominantly rely on magnitude-only Digital Imaging and Co…
Unsupervised Analysis of Alzheimer's Disease Signatures using 3D Deformable Autoencoders
Mehmet Yigit Avci, Emily Chan, Veronika Zimmer +4
With the increasing incidence of neurodegenerative diseases such as Alzheimer's Disease (AD), there is a need for further research that enhances detection and monitoring of the dis…
DCSM 2.0: Deep Conditional Shape Models for Data Efficient Segmentation
Athira J Jacob, Puneet Sharma, Daniel Rueckert
Segmentation is often the first step in many medical image analyses workflows. Deep learning approaches, while giving state-of-the-art accuracies, are data intensive and do not sca…
VIBESegmentator: Full Body MRI Segmentation for the NAKO and UK Biobank
Robert Graf, Paul-Sören Platzek, Evamaria Olga Riedel +17
Objectives: To present a publicly available deep learning-based torso segmentation model that provides comprehensive voxel-wise coverage, including delineations that extend to the…
MRSegmentator: Multi-Modality Segmentation of 40 Classes in MRI and CT
Hartmut Häntze, Lina Xu, Christian J. Mertens +29
Purpose: To develop and evaluate a deep learning model for multi-organ segmentation of MRI scans. Materials and Methods: The model was trained on 1,200 manually annotated 3D axial…
Diffusion Models with Implicit Guidance for Medical Anomaly Detection
Cosmin I. Bercea, Benedikt Wiestler, Daniel Rueckert +1
Diffusion models have advanced unsupervised anomaly detection by improving the transformation of pathological images into pseudo-healthy equivalents. Nonetheless, standard approach…
Topologically Faithful Multi-class Segmentation in Medical Images
Alexander H. Berger, Nico Stucki, Laurin Lux +6
Topological accuracy in medical image segmentation is a highly important property for downstream applications such as network analysis and flow modeling in vessels or cell counting…
SPINEPS -- Automatic Whole Spine Segmentation of T2-weighted MR images using a Two-Phase Approach to Multi-class Semantic and Instance Segmentation
Hendrik Möller, Robert Graf, Joachim Schmitt +16
Purpose. To present SPINEPS, an open-source deep learning approach for semantic and instance segmentation of 14 spinal structures (ten vertebra substructures, intervertebral discs,…
Towards Universal Unsupervised Anomaly Detection in Medical Imaging
Cosmin I. Bercea, Benedikt Wiestler, Daniel Rueckert +1
The increasing complexity of medical imaging data underscores the need for advanced anomaly detection methods to automatically identify diverse pathologies. Current methods face ch…
Denoising diffusion-based MRI to CT image translation enables automated spinal segmentation
Robert Graf, Joachim Schmitt, Sarah Schlaeger +8
Background: Automated segmentation of spinal MR images plays a vital role both scientifically and clinically. However, accurately delineating posterior spine structures presents ch…
Framing image registration as a landmark detection problem for label-noise-aware task representation (HitR)
Diana Waldmannstetter, Ivan Ezhov, Benedikt Wiestler +16
Accurate image registration is pivotal in biomedical image analysis, where selecting suitable registration algorithms demands careful consideration. While numerous algorithms are a…