Biochemical feedback and its application to immune cells II: dynamics and critical slowing down
arXiv:1902.02444 · doi:10.1103/PhysRevE.100.022415
Abstract
Near a bifurcation point, the response time of a system is expected to diverge due to the phenomenon of critical slowing down. We investigate critical slowing down in well-mixed stochastic models of biochemical feedback by exploiting a mapping to the mean-field Ising universality class. This mapping allows us to quantify critical slowing down in experiments where we measure the response of T cells to drugs. Specifically, the addition of a drug is equivalent to a sudden quench in parameter space, and we find that quenches that take the cell closer to its critical point result in slower responses. We further demonstrate that our class of biochemical feedback models exhibits the Kibble-Zurek collapse for continuously driven systems, which predicts the scaling of hysteresis in cellular responses to more gradual perturbations. We discuss the implications of our results in terms of the tradeoff between a precise and a fast response.
arXiv comment9 pages, 6 figures
References in corpus (12)
- Are biological systems poised at criticality?
- Universality of Phase Transition Dynamics: Topological Defects from Symmetry Breaking
- Colored extrinsic fluctuations and stochastic gene expression
- The Kibble-Zurek Problem: Universality and the Scaling Limit
- Kibble-Zurek mechanism in colloidal monolayers
- Spectral solutions to stochastic models of gene expression with bursts and regulation
- Thermodynamics of natural images
- A stochastic spectral analysis of transcriptional regulatory cascades
- Dynamics of cooperativity in chemical sensing among cell-surface receptors
- Kibble-Zurek scaling of the irreversible entropy production
- Bifurcation and Criticality
- Universality of biochemical feedback and its application to immune cells
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