output
20082025
most citedMLlib: Machine Learning in Apache Spark

961 citations

57 papers

physics.bio-ph2025★ 1 cited

FILM: Mapping organellar metabolism by mid-infrared photothermal modulated fluorescence

Jianpeng Ao, Jiaze Yin, Haonan Lin +10

Metabolism unfolds within specific organelles in eukaryotic cells. Lysosomes are highly metabolically active organelles, and their metabolic states dynamically influence signal tra…

eess.IV2025★ 4 cited

Fourier-Based 3D Multistage Transformer for Aberration Correction in Multicellular Specimens

Thayer Alshaabi, Daniel E. Milkie, Gaoxiang Liu +17

High-resolution tissue imaging is often compromised by sample-induced optical aberrations that degrade resolution and contrast. While wavefront sensor-based adaptive optics (AO) ca…

q-bio.QM2024

Prediction of Cellular Identities from Trajectory and Cell Fate Information

Baiyang Dai, Jiamin Yang, Hari Shroff +1

Determining cell identities in imaging sequences is an important yet challenging task. The conventional method for cell identification is via cell tracking, which is complex and ca…

physics.bio-ph2023★ 23 cited

A Markovian dynamics for C. elegans behavior across scales

Antonio C. Costa, Tosif Ahamed, David Jordan +1

How do we capture the breadth of behavior in animal movement, from rapid body twitches to aging? Using high-resolution videos of the nematode worm , we show that a sing…

physics.optics2022★ 1 cited

Localization of fixed dipoles at high precision by accounting for sample drift during illumination

Fabian Hinterer, Magdalena C. Schneider, Simon Hubmer +3

Single molecule localization microscopy relies on the precise quantification of the position of single dye emitters in a sample. This precision is improved by the number of photons…

physics.optics2021★ 126 cited

Measuring the knot of non-Hermitian degeneracies and non-commuting braids

Yogesh S. S. Patil, Judith Höller, Parker A. Henry +6

Any system of coupled oscillators may be characterized by its spectrum of resonance frequencies (or eigenfrequencies), which can be tuned by varying the system's parameters. The re…