activity
20172021
most citedFast amortized inference of neural activity from calcium imaging data with variational autoencoders

24 citations · 40 across the 3 of their papers we have counts for

collaborators

8 papers

eess.IV20217 cited

Learning Guided Electron Microscopy with Active Acquisition

Lu Mi, Hao Wang, Yaron Meirovitch +5

Single-beam scanning electron microscopes (SEM) are widely used to acquire massive data sets for biomedical study, material analysis, and fabrication inspection. Datasets are typic…

eess.IV2019

Teaching deep neural networks to localize single molecules for super-resolution microscopy

Artur Speiser, Lucas-Raphael Müller, Ulf Matti +5

Single-molecule localization fluorescence microscopy constructs super-resolution images by sequential imaging and computational localization of sparsely activated fluorophores. Acc…

cs.LG2019

Importance Weighted Adversarial Variational Autoencoders for Spike Inference from Calcium Imaging Data

Daniel Jiwoong Im, Sridhama Prakhya, Jinyao Yan +2

The Importance Weighted Auto Encoder (IWAE) objective has been shown to improve the training of generative models over the standard Variational Auto Encoder (VAE) objective. Here,…

cs.CV2018

Synaptic partner prediction from point annotations in insect brains

Julia Buhmann, Renate Krause, Rodrigo Ceballos Lentini +4

High-throughput electron microscopy allows recording of lar- ge stacks of neural tissue with sufficient resolution to extract the wiring diagram of the underlying neural network. C…

q-bio.NC2018

A Connectome Based Hexagonal Lattice Convolutional Network Model of the Drosophila Visual System

Fabian David Tschopp, Michael B. Reiser, Srinivas C. Turaga

What can we learn from a connectome? We constructed a simplified model of the first two stages of the fly visual system, the lamina and medulla. The resulting hexagonal lattice con…

stat.ML2018

Discrete flow posteriors for variational inference in discrete dynamical systems

Laurence Aitchison, Vincent Adam, Srinivas C. Turaga

Each training step for a variational autoencoder (VAE) requires us to sample from the approximate posterior, so we usually choose simple (e.g. factorised) approximate posteriors in…