output
20062025
most citedThe FRET-based structural dynamics challenge -- community contributions to consistent and open science practices

329 citations

22 papers

physics.optics2025

Understanding and improving axial detection in optical tweezers based on the interference of forward- and backward- scattered light

Isaac Pérez Castillo, Simon Leturcq, Sylvain Domitin +3

Fast and accurate 3D position detection in optical tweezers (OT) is essential for quantitatively monitoring subtle variations in the mechanical properties of microscopic systems ra…

q-bio.NC2025★ 155 cited

Long-term follow-up of DYT1 dystonia patients treated by deep brain stimulation: an open-label study

Laura Cif, Xavier Vasques, Victoria Gonzalez +7

Long-term efficacy of internal globus pallidus (GPi) deep-brain stimulation (DBS) in DYT1 dystonia and disease progression under DBS was studied. Twenty-six patients of this open-l…

cond-mat.stat-mech2024

Biologically relevant finite-size effects in a driven lattice gas with particle pausing and dynamical defects

Johannes Keisers, Lorenzo Vito Dal Zovo, Norbert Kern +1

In this article we present a comprehensive study of the totally asymmetric simple exclusion process with pausing particles (pTASEP), a model initially introduced to describe RNAP d…

q-bio.SC2024★ 4 cited

Optimal control of ribosome population for gene expression under periodic nutrient intake

Clément Soubrier, Eric Foxall, Luca Ciandrini +1

Translation of proteins is a fundamental part of gene expression that is mediated by ribosomes. As ribosomes significantly contribute to both cellular mass and energy consumption,…

physics.bio-ph2023

Signature of (anti)cooperativity in the stochastic fluctuations of small systems: application to the bacterial flagellar motor

María-José Franco-Oñate, Andrea Parmeggiani, Jérôme Dorignac +6

The cooperative binding of molecular agents onto a substrate is pervasive in living systems. To study whether a system shows cooperativity, one can rely on a fluctuation analysis o…

q-bio.SC2023★ 6 cited

Exclusion model of mRNA translation with collision-induced ribosome drop-off

Johannes Keisers, Joachim Krug

The translation of messenger RNA transcripts to proteins is commonly modeled as a one-dimensional totally asymmetric exclusion process with extended particles. Here we focus on the…