output
20112026
most citedDirect-coupling analysis of residue co-evolution captures native contacts across many protein families

1.6k citations

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Counting papers with at most 25 authors, so collaboration author lists do not stand in for the people here.

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Showing 2022Show all

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cond-mat.dis-nn2022★ 28 cited

Machine-learning-assisted Monte Carlo fails at sampling computationally hard problems

Simone Ciarella, Jeanne Trinquier, Martin Weigt +1

Several strategies have been recently proposed in order to improve Monte Carlo sampling efficiency using machine learning tools. Here, we challenge these methods by considering a c…

q-bio.BM2022★ 14 cited

Combining phylogeny and coevolution improves the inference of interaction partners among paralogous proteins

Carlos A. Gandarilla-Perez, Sergio Pinilla, Anne-Florence Bitbol +1

Predicting protein-protein interactions from sequences is an important goal of computational biology. Various sources of information can be used to this end. Starting from the sequ…

cond-mat.soft2022★ 13 cited

Soft disorder modulates the assembly path of protein complexes

Beatriz Seoane, Alessandra Carbone

The relationship between interactions, flexibility and disorder in proteins has been explored from many angles: folding upon binding, flexibility of the core relative to the periph…