871 citations
Counting papers with at most 25 authors, so collaboration author lists do not stand in for the people here.
- Centre National de la Recherche ScientifiqueFR34 papers
- Lyon 1 UniversitéFR33 papers
- Université de LyonFR14 papers
- Institut national de recherche en sciences et technologies du numériqueFR10 papers
- École Normale Supérieure de LyonFR6 papers
- Centre Inria de l'Université Grenoble AlpesFR5 papers
- Université Grenoble AlpesFR5 papers
- Institut polytechnique de GrenobleFR4 papers
- Laboratoire de Probabilités, Statistique et ModélisationFR4 papers
- Sorbonne UniversitéFR4 papers
- Université de MontpellierFR4 papers
- Université Paris CitéFR4 papers
6 papers · 1 filter
FAIR Data Pipeline: provenance-driven data management for traceable scientific workflows
Sonia Natalie Mitchell, Andrew Lahiff, Nathan Cummings +35
Modern epidemiological analyses to understand and combat the spread of disease depend critically on access to, and use of, data. Rapidly evolving data, such as data streams changin…
Gene tree species tree reconciliation with gene conversion
Damir Hasic, Eric Tannier
Gene tree/species tree reconciliation is a recent decisive progress in phylo-genetic methods, accounting for the possible differences between gene histories and species histories.…
Weighted Statistical Binning: enabling statistically consistent genome-scale phylogenetic analyses
Md. Shamsuzzoha Bayzid, Siavash Mirarab, Bastien Boussau +1
Because biological processes can make different loci have different evolutionary histories, species tree estimation requires multiple loci from across the genome. While many proces…
Estimating Potential Infection Transmission Routes in Hospital Wards Using Wearable Proximity Sensors
Philippe Vanhems, Alain Barrat, Ciro Cattuto +6
Contacts between patients, patients and health care workers (HCWs) and among HCWs represent one of the important routes of transmission of hospital-acquired infections (HAI). A det…
Simulation of an SEIR infectious disease model on the dynamic contact network of conference attendees
Juliette Stehlé, Nicolas Voirin, Alain Barrat +8
The spread of infectious diseases crucially depends on the pattern of contacts among individuals. Knowledge of these patterns is thus essential to inform models and computational e…
Computing the likelihood of sequence segmentation under Markov modelling
Laurent Guéguen
I tackle the problem of partitioning a sequence into homogeneous segments, where homogeneity is defined by a set of Markov models. The problem is to study the likelihood that a seq…