122 citations · 185 across the 6 of their papers we have counts for
6 papers
Likelihood-free inference of phylogenetic tree posterior distributions
Luc Blassel, Noémie Sauvage, Pierre Barrat-Charlaix +3
Phylogenetic inference, the task of reconstructing how related sequences evolved from common ancestors, is a central objective in evolutionary genomics. The current state-of-the-ar…
Genome-scale phylogenetic analysis finds extensive gene transfer among Fungi
Gergely J. Szöllősi, Adrián Arellano Davín, Eric Tannier +2
Although the role of lateral gene transfer is well recognized in the evolution of bacteria, it is generally assumed that it has had less influence among eukaryotes. To explore this…
Weighted Statistical Binning: enabling statistically consistent genome-scale phylogenetic analyses
Md. Shamsuzzoha Bayzid, Siavash Mirarab, Bastien Boussau +1
Because biological processes can make different loci have different evolutionary histories, species tree estimation requires multiple loci from across the genome. While many proces…
Probabilistic Graphical Model Representation in Phylogenetics
Sebastian Höhna, Tracy A. Heath, Bastien Boussau +3
Recent years have seen a rapid expansion of the model space explored in statistical phylogenetics, emphasizing the need for new approaches to statistical model representation and s…
The inference of gene trees with species trees
Gergely J. Szöllosi, Eric Tannier, Vincent Daubin +1
Molecular phylogeny has focused mainly on improving models for the reconstruction of gene trees based on sequence alignments. Yet, most phylogeneticists seek to reveal the history…
Efficient Exploration of the Space of Reconciled Gene Trees
Gergely J. Szöllősi, Wojciech Rosikiewicz, Bastien Boussau +2
Gene trees record the combination of gene level events, such as duplication, transfer and loss, and species level events, such as speciation and extinction. Gene tree-species tree…