output
20112025
most citedFinding undetected protein associations in cell signaling by belief propagation

128 citations

21 papers

q-bio.PE2025

Likelihood-free inference of phylogenetic tree posterior distributions

Luc Blassel, Noémie Sauvage, Pierre Barrat-Charlaix +3

Phylogenetic inference, the task of reconstructing how related sequences evolved from common ancestors, is a central objective in evolutionary genomics. The current state-of-the-ar…

math.CO2025

Largest planar graphs of diameter and fixed maximum degree -- connection with fractional matchings

Antoine Dailly, Sasha Darmon, Ugo Giocanti +2

The degree diameter problem asks for the maximum possible number of vertices in a graph of maximum degree and diameter . In this paper, we focus on planar graphs of diameter…

q-bio.PE2024★ 5 cited

The expensive son hypothesis

Lucas Invernizzi, Jean-françois Lemaître, Mathieu Douhard

In its initial form, the expensive son hypothesis postulates that sons from male-biased sexually dimorphic species require more food during growth than daughters, which ultimately…

q-bio.PE2024★ 3 cited

Inner ear morphology in wild versus laboratory house mice

Sabrina Renaud, Léa Amar, Pascale Chevret +4

The semicircular canals of the inner ear are involved in balance and velocity control. Being crucial to ensure efficient mobility, their morphology exhibits an evolutionary conserv…

cs.CC2024

Complexity of the Swap Median and Swap Closest Problems

Luís Cunha, Thiago Lopes, Arnaud Mary

Genome rearrangement distances provide a combinatorial framework for comparing genomes represented as permutations. Although the swap distance between two permutations is polynomia…

math.CO2024

Enumeration of minimal transversals of hypergraphs of bounded VC-dimension

Arnaud Mary

We consider the problem of enumerating all minimal transversals (also called minimal hitting sets) of a hypergraph . An equivalent formulation of this problem known as…