38 citations · 107 across the 6 of their papers we have counts for
16 papers
Adapt or perish: Evolutionary rescue in a gradually deteriorating environment
Loïc Marrec, Anne-Florence Bitbol
We investigate the evolutionary rescue of a microbial population in a gradually deteriorating environment, through a combination of analytical calculations and stochastic simulatio…
Statistical physics of interacting proteins: impact of dataset size and quality assessed in synthetic sequences
Carlos A. Gandarilla-Pérez, Pierre Mergny, Martin Weigt +1
Identifying protein-protein interactions is crucial for a systems-level understanding of the cell. Recently, algorithms based on inverse statistical physics, e.g. Direct Coupling A…
Mitochondrial cristae modeled as an out-of-equilibrium membrane driven by a proton field
Nirbhay Patil, Stéphanie Bonneau, Fréderic Joubert +2
As the places where most of the fuel of the cell, namely ATP, is synthesized, mitochondria are crucial organelles in eukaryotic cells. The shape of the invaginations of the mitocho…
Resist or perish: fate of a microbial population subjected to a periodic presence of antimicrobial
Loïc Marrec, Anne-Florence Bitbol
The evolution of antimicrobial resistance can be strongly affected by variations of antimicrobial concentration. Here, we study the impact of periodic alternations of absence and p…
Phylogenetic correlations can suffice to infer protein partners from sequences
Guillaume Marmier, Martin Weigt, Anne-Florence Bitbol
Determining which proteins interact together is crucial to a systems-level understanding of the cell. Recently, algorithms based on Direct Coupling Analysis (DCA) pairwise maximum-…
Antibody-mediated cross-linking of gut bacteria hinders the spread of antibiotic resistance
Florence Bansept, Loïc Marrec, Anne-Florence Bitbol +1
The body is home to a diverse microbiota, mainly in the gut. Resistant bacteria are selected for by antibiotic treatments, and once resistance becomes widespread in a population of…