activity
20092026
most citedInferring interaction partners from protein sequences

174 citations · 1.2k across the 47 of their papers we have counts for

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Showing physics.bio-phShow all

9 papers · 1 filter

physics.bio-ph2023★ 7 cited

Universal Casimir attraction between filaments at the cell scale

Benjamin Spreng, Hélène Berthoumieux, Astrid Lambrecht +3

The electromagnetic Casimir interaction between dielectric objects immersed in salted water includes a universal contribution that is not screened by the solvent and therefore long…

physics.bio-ph2023

A universal attractive interaction between filaments at the cell scale

Anne-Florence Bitbol, Hélène Berthoumieux, Benjamin Spreng +2

Actin filaments and microtubules both often form bundles of parallel filaments within cells. Here, we shed light on a universal attractive interaction between two such parallel fil…

physics.bio-ph2021★ 27 cited

Hydrodynamic flow and concentration gradients in the gut enhance neutral bacterial diversity

Darka Labavić, Claude Loverdo, Anne-Florence Bitbol

The gut microbiota features important genetic diversity, and the specific spatial features of the gut may shape evolution within this environment. We investigate the fixation proba…

physics.bio-ph2019★ 17 cited

Mitochondrial cristae modeled as an out-of-equilibrium membrane driven by a proton field

Nirbhay Patil, Stéphanie Bonneau, Fréderic Joubert +2

As the places where most of the fuel of the cell, namely ATP, is synthesized, mitochondria are crucial organelles in eukaryotic cells. The shape of the invaginations of the mitocho…

physics.bio-ph2019★ 5 cited

Membrane-mediated interactions

Anne-Florence Bitbol, Doru Constantin, Jean-Baptiste Fournier

Interactions mediated by the cell membrane between inclusions, such as membrane proteins or antimicrobial peptides, play important roles in their biological activity. They also con…

physics.bio-ph2018★ 98 cited

pH Sensing by Lipids in Membranes: The Fundamentals of pH-driven Migration, Polarization and Deformations of Lipid Bilayer Assemblies

Miglena I. Angelova, Anne-Florence Bitbol, Michel Seigneuret +6

Most biological molecules contain acido-basic groups that modulate their structure and interactions. A consequence is that pH gradients, local heterogeneities and dynamic variation…

physics.bio-ph2018★ 19 cited

Quantifying the impact of a periodic presence of antimicrobial on resistance evolution in a homogeneous microbial population of fixed size

Loïc Marrec, Anne-Florence Bitbol

The evolution of antimicrobial resistance generally occurs in an environment where antimicrobial concentration is variable, which has dramatic consequences on the microorganisms' f…

physics.bio-ph2016★ 174 cited

Inferring interaction partners from protein sequences

Anne-Florence Bitbol, Robert S. Dwyer, Lucy J. Colwell +1

Specific protein-protein interactions are crucial in the cell, both to ensure the formation and stability of multi-protein complexes, and to enable signal transduction in various p…

physics.bio-ph2015★ 18 cited

Fundamental constraints on the abundances of chemotaxis proteins

Anne-Florence Bitbol, Ned S. Wingreen

Flagellated bacteria, such as Escherichia coli, perform directed motion in gradients of concentration of attractants and repellents in a process called chemotaxis. The E. coli chem…