output
20082025
most citedUnderstanding metric-related pitfalls in image analysis validation

204 citations

18 papers

cs.DB2025

The NIAID Discovery Portal: A Unified Search Engine for Infectious and Immune-Mediated Disease Datasets

Ginger Tsueng, Emily Bullen, Candice Czech +18

The NIAID Data Ecosystem Discovery Portal (https://data.niaid.nih.gov) provides a unified search interface for over 4 million datasets relevant to infectious and immune-mediated di…

stat.ME2025★ 4 cited

Retrospective score tests versus prospective score tests for genetic association with case-control data

Yukun Liu, Pengfei Li, Lei Song +2

Since the seminal work by Prentice and Pyke (1979), the prospective logistic likelihood has become the standard method of analysis for retrospectively collected case-control data,…

stat.ME2025★ 7 cited

Instability of inverse probability weighting methods and a remedy for non-ignorable missing data

Pengfei Li, Jing Qin, Yukun Liu

Inverse probability weighting (IPW) methods are commonly used to analyze non-ignorable missing data under the assumption of a logistic model for the missingness probability. Howeve…

stat.ME2025★ 4 cited

Empirical likelihood meta analysis with publication bias correction under Copas-like selection model

Mengke Li, Yukun Liu, Pengfei Li +1

Meta analysis is commonly-used to synthesize multiple results from individual studies. However, its validation is usually threatened by publication bias and between-study heterogen…

stat.ME2025★ 1 cited

A mixture distribution approach for assessing genetic impact from twin study

Zonghui Hu, Pengfei Li, Dean Follmann +1

This work was motivated by a twin study with the goal of assessing the genetic control of immune traits. We propose a mixture bivariate distribution to model twin data where the un…

q-bio.TO2024

The IBEX Imaging Knowledge-Base: A Community Resource Enabling Adoption and Development of Immunofluoresence Imaging Methods

Ziv Yaniv, Ifeanyichukwu U. Anidi, Leanne Arakkal +59

The iterative bleaching extends multiplexity (IBEX) Knowledge-Base is a central portal for researchers adopting IBEX and related 2D and 3D immunofluorescence imaging methods. The d…