activity
19992024
most citedSIMMUNE, a tool for simulating and analyzing immune system behavior

56 citations · 89 across the 17 of their papers we have counts for

collaborators

17 papers

q-bio.QM2024

Timing consistency of T cell receptor activation in a stochastic model combining kinetic segregation and proofreading

Thorsten Prüstel, Martin Meier-Schellersheim

T cell receptor signaling must operate reliably under tight time constraints. While assuming quite different mechanisms, two prominent models of T cell receptor activation, kinetic…

q-bio.QM2023

Grid-free stochastic simulations of reaction-diffusion processes at cell-cell contacts

Thorsten Prüstel, Martin Meier-Schellersheim

Biological cells can exchange messages through soluble molecules or membrane-bound receptors. In particular in the latter case, the interaction is usually located in specific regio…

q-bio.QM2020

Stochastic single-particle based simulations of cellular signaling embedded into computational models of cellular morphology

Thorsten Prüstel, Martin Meier-Schellersheim

Cells exhibit a wide variety of different shapes. This diversity poses a challenge for computational approaches that attempt to shed light on the role cell geometry plays in regula…

q-bio.QM2016★ 3 cited

Path integral approach to theories of diffusion-influenced reactions

Thorsten Prüstel, Martin Meier-Schellersheim

The path decomposition expansion represents the propagator of the irreversible reaction as a convolution of the first-passage, last-passage and rebinding time probability densities…

q-bio.QM2015★ 2 cited

Exact propagation without analytical solutions

Thorsten Prüstel, Martin Meier-Schellersheim

We present a simulation algorithm that accurately propagates a molecule pair using large time steps without the need to invoke the full exact analytical solutions of the Smoluchows…

q-bio.QM2015★ 2 cited

Quantum mechanical inspired factorization of the molecule pair propagator in theories of diffusion-influenced reactions

Thorsten Prüstel, Martin Meier-Schellersheim

Building on mathematical similarities between quantum mechanics and theories of diffusion-influenced reactions, we discuss how the propagator of a reacting molecule pair can be rep…