output
20022024
most citedIdentification of direct residue contacts in protein-protein interaction by message passing

1.1k citations

Showing 2019Show all

6 papers · 1 filter

cond-mat.soft20199 cited

The Effect of Obstacles in Multi-Site Protein Target Search with DNA Looping

Cayke Felipe, Jaeoh Shin, Yulia Loginova +1

Many fundamental biological processes are regulated by protein-DNA complexes called {\it synaptosomes}, which possess multiple interaction sites. Despite the critical importance of…

physics.chem-ph2019925 cited

Machine learning for molecular simulation

Frank Noé, Alexandre Tkatchenko, Klaus-Robert Müller +1

Machine learning (ML) is transforming all areas of science. The complex and time-consuming calculations in molecular simulations are particularly suitable for a machine learning re…

physics.chem-ph20194 cited

The Peculiar Size and Temperature Dependence of Water Diffusion in Carbon Nanotubes studied with 2D NMR Diffusion-Relaxation D-T2eff Spectroscopy

L. Gkoura, G. Diamantopoulos, M. Fardis +8

It is well known that water inside hydrophobic nano-channels diffuses faster than bulk water. Recent theoretical studies have shown that this enhancement depends on the size of the…

hep-th201946 cited

Multipartite Reflected Entropy

Ning Bao, Newton Cheng

We discuss two methods that, through a combination of cyclically gluing copies of a given -party boundary state in AdS/CFT and a canonical purification, creates a bulk geometry…

hep-th201930 cited

On Extensions of Kac-Moody algebras and Calabi-Yau Singularities

Miroslav Rapcak

We discuss a class of vertex operator algebras generated by a super-matrix of fields for each integral spin . The algebras admit a lar…

q-bio.CB20192 cited

Quantifying cancer epithelial-mesenchymal plasticity and its association with stemness and immune response

Dongya Jia, Xuefei Li, Federico Bocci +5

Cancer cells can acquire a spectrum of stable hybrid epithelial/mesenchymal (E/M) states during epithelial-mesenchymal transition (EMT). Cells in these hybrid E/M phenotypes often…