output
20102026
most citedNiftyNet: a deep-learning platform for medical imaging

563 citations

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9 papers · 1 filter

cs.CV2026

Evaluation of Uncertainty-Aware Multi-Software Ensembles for Hippocampal Segmentation

Gabriel Oliveira-Stahl, Anna Schroder, James Moggridge +6

Accurate hippocampal segmentation can be a useful tool for diagnosing and monitoring neurological conditions such as Alzheimer's disease and epilepsy. While numerous automated segm…

cs.CV2022★ 29 cited

Brain tumour segmentation with incomplete imaging data

James K Ruffle, Samia Mohinta, Robert J Gray +2

The complex heterogeneity of brain tumours is increasingly recognized to demand data of magnitudes and richness only fully-inclusive, large-scale collections drawn from routine cli…

cs.CV2021

Vessel-CAPTCHA: an efficient learning framework for vessel annotation and segmentation

Vien Ngoc Dang, Francesco Galati, Rosa Cortese +7

Deep learning techniques for 3D brain vessel image segmentation have not been as successful as in the segmentation of other organs and tissues. This can be explained by two factors…

cs.CV2020★ 26 cited

Flexible Bayesian Modelling for Nonlinear Image Registration

Mikael Brudfors, Yaël Balbastre, Guillaume Flandin +2

We describe a diffeomorphic registration algorithm that allows groups of images to be accurately aligned to a common space, which we intend to incorporate into the SPM software. Th…

cs.CV2019★ 1 cited

Grey matter sublayer thickness estimation in themouse cerebellum

Da Ma, Manuel J. Cardoso, Maria A. Zuluaga +7

The cerebellar grey matter morphology is an important feature to study neurodegenerative diseases such as Alzheimer's disease or Down's syndrome. Its volume or thickness is commonl…

cs.CV2018★ 5 cited

Elastic Registration of Geodesic Vascular Graphs

Stefano Moriconi, Maria A. Zuluaga, H. Rolf Jager +3

Vascular graphs can embed a number of high-level features, from morphological parameters, to functional biomarkers, and represent an invaluable tool for longitudinal and cross-sect…

cs.CV2018★ 12 cited

An Algorithm for Learning Shape and Appearance Models without Annotations

John Ashburner, Mikael Brudfors, Kevin Bronik +1

This paper presents a framework for automatically learning shape and appearance models for medical (and certain other) images. It is based on the idea that having a more accurate s…

cs.CV2018★ 12 cited

VTrails: Inferring Vessels with Geodesic Connectivity Trees

Stefano Moriconi, Maria A. Zuluaga, H. Rolf Jäger +3

The analysis of vessel morphology and connectivity has an impact on a number of cardiovascular and neurovascular applications by providing patient-specific high-level quantitative…

cs.CV2017★ 563 cited

NiftyNet: a deep-learning platform for medical imaging

Eli Gibson, Wenqi Li, Carole Sudre +14

Medical image analysis and computer-assisted intervention problems are increasingly being addressed with deep-learning-based solutions. Established deep-learning platforms are flex…