28 citations
Counting papers with at most 25 authors, so collaboration author lists do not stand in for the people here.
- Sanford Burnham Prebys Medical Discovery InstituteUS2 papers
- Center for Integrated NanotechnologiesUS1 paper
- Center for Theoretical Biological PhysicsUS1 paper
- German Research Centre for Artificial IntelligenceDE1 paper
- Hong Kong Polytechnic UniversityHK1 paper
- Johns Hopkins UniversityUS1 paper
- Los Alamos National LaboratoryUS1 paper
- Monash UniversityAU1 paper
- Northern Arizona UniversityUS1 paper
- Rice UniversityUS1 paper
- Sandia National LaboratoriesUS1 paper
- Shihezi UniversityCN1 paper
6 papers
Rethinking Cancer Gene Identification through Graph Anomaly Analysis
Yilong Zang, Lingfei Ren, Yue Li +7
Graph neural networks (GNNs) have shown promise in integrating protein-protein interaction (PPI) networks for identifying cancer genes in recent studies. However, due to the insuff…
A reduced order Schwarz method for nonlinear multiscale elliptic equations based on two-layer neural networks
Shi Chen, Zhiyan Ding, Qin Li +1
Neural networks are powerful tools for approximating high dimensional data that have been used in many contexts, including solution of partial differential equations (PDEs). We des…
Ultra-Sharp Nanowire Arrays Natively Permeate, Record, and Stimulate Intracellular Activity in Neuronal and Cardiac Networks
Ren Liu, Jihwan Lee, Youngbin Tchoe +16
Intracellular access with high spatiotemporal resolution can enhance our understanding of how neurons or cardiomyocytes regulate and orchestrate network activity, and how this acti…
Fitting Splines to Axonal Arbors Quantifies Relationship between Branch Order and Geometry
Thomas L. Athey, Jacopo Teneggi, Joshua T. Vogelstein +3
Neuromorphology is crucial to identifying neuronal subtypes and understanding learning. It is also implicated in neurological disease. However, standard morphological analysis focu…
Determining the atomic charge of calcium ion requires the information of its coordination geometry in an EF-hand motif
Pengzhi Zhang, Jaebeom Han, Piotr Cieplak +1
It is challenging to parameterize the force field for calcium ions (Ca2+) in calcium-binding proteins because of their unique coordination chemistry that involves the surrounding a…
Efficient Formulation of Polarizable Gaussian Multipole Electrostatics for Biomolecular Simulations
Haixin Wei, Ruxi Qi, Junmei Wang +3
Molecular dynamics simulations of biomolecules have been widely adopted in biomedical studies. As classical point-charge models continue to be used in routine biomolecular applicat…