4 papers
Estimating Diffeomorphic Mappings between Templates and Noisy Data: Variance Bounds on the Estimated Canonical Volume Form
Daniel J. Tward, Partha Mitra, Michael I. Miller
Anatomy is undergoing a renaissance driven by availability of large digital data sets generated by light microscopy. A central computational task is to map individual data volumes…
A Community-Developed Open-Source Computational Ecosystem for Big Neuro Data
Randal Burns, Eric Perlman, Alex Baden +27
Big imaging data is becoming more prominent in brain sciences across spatiotemporal scales and phylogenies. We have developed a computational ecosystem that enables storage, visual…
NeuroStorm: Accelerating Brain Science Discovery in the Cloud
Gregory Kiar, Robert J. Anderson, Alex Baden +24
Neuroscientists are now able to acquire data at staggering rates across spatiotemporal scales. However, our ability to capitalize on existing datasets, tools, and intellectual capa…
On variational solutions for whole brain serial-section histology using the computational anatomy random orbit model
Brian C. Lee, Daniel J. Tward, Partha P. Mitra +1
This paper presents a variational framework for dense diffeomorphic atlas-mapping onto high-throughput histology stacks at the 20 um meso-scale. The observed sections are modelled…