150 citations
Counting papers with at most 25 authors, so collaboration author lists do not stand in for the people here.
- University College LondonGB4 papers
- National Cancer InstituteUS3 papers
- National Institutes of HealthUS3 papers
- BioLegend (United States)US2 papers
- ETH ZurichCH2 papers
- Immune Regulation (United Kingdom)GB2 papers
- Indiana University BloomingtonUS2 papers
- Instituto do Câncer do Estado de São PauloBR2 papers
- La Jolla Institute for ImmunologyUS2 papers
- McMaster UniversityCA2 papers
- McMaster University Medical CentreCA2 papers
- MRC Laboratory of Molecular BiologyGB2 papers
7 papers
ViroBench: Benchmarking Nucleotide Foundation Models on Viral Genomics Tasks
Dongxin Ye, Fang Hu, Han Hu +6
Nucleotide sequences constitute the fundamental genetic basis of biological systems, rendering viral genomic analysis critical for biomedical advancement. Despite progress in biolo…
The IBEX Imaging Knowledge-Base: A Community Resource Enabling Adoption and Development of Immunofluoresence Imaging Methods
Ziv Yaniv, Ifeanyichukwu U. Anidi, Leanne Arakkal +59
The iterative bleaching extends multiplexity (IBEX) Knowledge-Base is a central portal for researchers adopting IBEX and related 2D and 3D immunofluorescence imaging methods. The d…
DiffPaSS -- High-performance differentiable pairing of protein sequences using soft scores
Umberto Lupo, Damiano Sgarbossa, Martina Milighetti +1
Identifying interacting partners from two sets of protein sequences has important applications in computational biology. Interacting partners share similarities across species due…
The IBEX Knowledge-Base: Achieving more together with open science
Andrea J. Radtke, Ifeanyichukwu Anidi, Leanne Arakkal +55
Iterative Bleaching Extends multipleXity (IBEX) is a versatile method for highly multiplexed imaging of diverse tissues. Based on open science principles, we created the IBEX Knowl…
The NOSTRA model: coherent estimation of infection sources in the case of possible nosocomial transmission
David J Pascall, Chris Jackson, Stephanie Evans +8
Nosocomial infections have important consequences for patients and hospital staff: they worsen patient outcomes and their management stresses already overburdened health systems. A…
Surfactant amplifies yield-stress effects in the capillary instability of a film coating a tube
James D. Shemilt, Alex Horsley, Oliver E. Jensen +2
To assess how the presence of surfactant in lung airways alters the flow of mucus that leads to plug formation and airway closure, we investigate the effect of insoluble surfactant…
Towards defining reference materials for extracellular vesicle size, concentration, refractive index and epitope abundance
Joshua A. Welsh, Edwin van der Pol, Britta A. Bettin +11
Accurate characterization of extracellular vesicles (EVs) is critical to explore their diagnostic and therapeutic applications. As the EV research field has developed, so too have…