output
19992026
most citedSparse Graph Codes for Quantum Error-Correction

383 citations

83 papers

cs.CL2026

Neural Circuit Function Inference with LLMs

Yijie Yin, Albert Cardona

The success of connectome mapping now shifts the challenge of understanding the nervous system to the interpretation of neural circuits. Here, we devise a new automated method, LLa…

q-bio.TO2024

The IBEX Imaging Knowledge-Base: A Community Resource Enabling Adoption and Development of Immunofluoresence Imaging Methods

Ziv Yaniv, Ifeanyichukwu U. Anidi, Leanne Arakkal +59

The iterative bleaching extends multiplexity (IBEX) Knowledge-Base is a central portal for researchers adopting IBEX and related 2D and 3D immunofluorescence imaging methods. The d…

physics.chem-ph2024★ 33 cited

On the design space between molecular mechanics and machine learning force fields

Yuanqing Wang, Kenichiro Takaba, Michael S. Chen +14

A force field as accurate as quantum mechanics (QM) and as fast as molecular mechanics (MM), with which one can simulate a biomolecular system efficiently enough and meaningfully e…

q-bio.TO2024★ 1 cited

The IBEX Knowledge-Base: Achieving more together with open science

Andrea J. Radtke, Ifeanyichukwu Anidi, Leanne Arakkal +55

Iterative Bleaching Extends multipleXity (IBEX) is a versatile method for highly multiplexed imaging of diverse tissues. Based on open science principles, we created the IBEX Knowl…

astro-ph.EP2024★ 17 cited

Astrobiological Potential of Venus Atmosphere Chemical Anomalies and Other Unexplained Cloud Properties

Janusz J. Petkowski, Sara Seager, David H. Grinspoon +7

Long-standing unexplained Venus atmosphere observations and chemical anomalies point to unknown chemistry but also leave room for the possibility of life. The unexplained observati…

q-bio.BM2023★ 36 cited

Community recommendations on cryoEM data archiving and validation

Gerard J. Kleywegt, Paul D. Adams, Sarah J. Butcher +44

In January 2020, a workshop was held at EMBL-EBI (Hinxton, UK) to discuss data requirements for deposition and validation of cryoEM structures, with a focus on single-particle anal…