output
19982026
most citedCount-based differential expression analysis of RNA sequencing data using R and Bioconductor

1.2k citations

Showing 2022Show all

5 papers · 1 filter

physics.bio-ph2022★ 20 cited

Intramolecular Structural Heterogeneity altered by Long-range Contacts in an Intrinsically Disordered Protein

Gil Koren, Sagi Meir, Lennard Holschuh +9

Short-range interactions and long-range contacts drive the 3D folding of structured proteins. The proteins' structure has a direct impact on their biological function. However, nea…

cs.DB2022★ 72 cited

Ontology Development Kit: a toolkit for building, maintaining, and standardising biomedical ontologies

Nicolas Matentzoglu, Damien Goutte-Gattat, Shawn Zheng Kai Tan +24

Similar to managing software packages, managing the ontology life cycle involves multiple complex workflows such as preparing releases, continuous quality control checking, and dep…

cs.CV2022★ 469 cited

Metrics reloaded: Recommendations for image analysis validation

Lena Maier-Hein, Annika Reinke, Patrick Godau +71

Increasing evidence shows that flaws in machine learning (ML) algorithm validation are an underestimated global problem. Particularly in automatic biomedical image analysis, chosen…

cs.DB2022★ 109 cited

Biolink Model: A Universal Schema for Knowledge Graphs in Clinical, Biomedical, and Translational Science

Deepak R. Unni, Sierra A. T. Moxon, Michael Bada +21

Within clinical, biomedical, and translational science, an increasing number of projects are adopting graphs for knowledge representation. Graph-based data models elucidate the int…

cond-mat.stat-mech2022★ 23 cited

Modelling Active Non-Markovian Oscillations

Gennaro Tucci, Édgar Roldán, Andrea Gambassi +4

Modelling noisy oscillations of active systems is one of the current challenges in physics and biology. Because the physical mechanisms of such processes are often difficult to ide…