activity
20162023
most citedMolTrans: Molecular Interaction Transformer for Drug Target Interaction Prediction

678 citations · 2.6k across the 71 of their papers we have counts for

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Showing 2021Show all

8 papers · 1 filter

math.NA2021★ 4 cited

MTC: Multiresolution Tensor Completion from Partial and Coarse Observations

Chaoqi Yang, Navjot Singh, Cao Xiao +3

Existing tensor completion formulation mostly relies on partial observations from a single tensor. However, tensors extracted from real-world data are often more complex due to: (i…

cs.LG2021★ 3 cited

Locally Valid and Discriminative Prediction Intervals for Deep Learning Models

Zhen Lin, Shubhendu Trivedi, Jimeng Sun

Crucial for building trust in deep learning models for critical real-world applications is efficient and theoretically sound uncertainty quantification, a task that continues to be…

cs.LG2021

Multi-version Tensor Completion for Time-delayed Spatio-temporal Data

Cheng Qian, Nikos Kargas, Cao Xiao +3

Real-world spatio-temporal data is often incomplete or inaccurate due to various data loading delays. For example, a location-disease-time tensor of case counts can have multiple d…

cs.LG2021★ 2 cited

Change Matters: Medication Change Prediction with Recurrent Residual Networks

Chaoqi Yang, Cao Xiao, Lucas Glass +1

Deep learning is revolutionizing predictive healthcare, including recommending medications to patients with complex health conditions. Existing approaches focus on predicting all m…

cs.LG2021★ 2 cited

Machine Learning Applications for Therapeutic Tasks with Genomics Data

Kexin Huang, Cao Xiao, Lucas M. Glass +3

Thanks to the increasing availability of genomics and other biomedical data, many machine learning approaches have been proposed for a wide range of therapeutic discovery and devel…

cs.LG2021

SCRIB: Set-classifier with Class-specific Risk Bounds for Blackbox Models

Zhen Lin, Cao Xiao, Lucas Glass +2

Despite deep learning (DL) success in classification problems, DL classifiers do not provide a sound mechanism to decide when to refrain from predicting. Recent works tried to cont…

cs.LG2021★ 163 cited

Therapeutics Data Commons: Machine Learning Datasets and Tasks for Drug Discovery and Development

Kexin Huang, Tianfan Fu, Wenhao Gao +7

Therapeutics machine learning is an emerging field with incredible opportunities for innovatiaon and impact. However, advancement in this field requires formulation of meaningful l…

cs.LG2021★ 15 cited

PyHealth: A Python Library for Health Predictive Models

Yue Zhao, Zhi Qiao, Cao Xiao +2

Despite the explosion of interest in healthcare AI research, the reproducibility and benchmarking of those research works are often limited due to the lack of standard benchmark da…