activity
20142022
most citedEnergy-based Analysis of Biochemical Cycles using Bond Graphs

71 citations · 405 across the 25 of their papers we have counts for

collaborators

25 papers

q-bio.TO2022

Modelling realistic 3D deformations of simple epithelia in dynamic homeostasis

Domenic P. J. Germano, Stuart T. Johnston, Edmund J. Crampin +1

The maintenance of tissue and organ structures during dynamic homeostasis is often not well understood. In order for a system to be stable, cell renewal, cell migration and cell de…

q-bio.TO2021★ 6 cited

Multiscale modelling of desquamation in the interfollicular epidermis

Claire Miller, Edmund Crampin, James Osborne

Maintenance of epidermal thickness is critical to the barrier function of the skin. Decreased tissue thickness, specifically in the stratum corneum (the outermost layer of the tiss…

q-bio.PE2020★ 5 cited

Predicting population extinction in lattice-based birth-death-movement models

Stuart T. Johnston, Matthew J. Simpson, Edmund J. Crampin

The question of whether a population will persist or go extinct is of key interest throughout ecology and biology. Various mathematical techniques allow us to generate knowledge re…

eess.SY2019★ 6 cited

Computer-aided modelling of complex physical systems with BondGraphTools

Peter Cudmore, Peter J. Gawthrop, Michael Pan +1

BondGraphTools is a Python library for scripted modelling of complex multi-physics systems. In contrast to existing modelling solutions, BondGraphTools is based upon the well estab…

q-bio.QM2019★ 19 cited

Physically-Plausible Modelling of Biomolecular Systems: A Simplified, Energy-Based Model of the Mitochondrial Electron Transport Chain

Peter J. Gawthrop, Peter Cudmore, Edmund J. Crampin

Systems biology and whole-cell modelling are demanding increasingly comprehensive mathematical models of cellular biochemistry. These models require the development of simplified m…

q-bio.SC2019★ 24 cited

Ca2+ release via IP3 receptors shapes the cytosolic Ca2+ transient for hypertrophic signalling in ventricular cardiomyocytes

Hilary Hunt, Agne Tilunaite, Greg Bass +4

Calcium (Ca2+) plays a central role in mediating both contractile function and hypertrophic signalling in ventricular cardiomyocytes. L-type Ca2+ channels trigger release of Ca2+ f…