activity
19952023
most citedSpecificity and stability in topology of protein networks

3.1k citations · 7.1k across the 62 of their papers we have counts for

collaborators

62 papers

q-bio.QM2023

Semi-Quantitative Group Testing for Efficient and Accurate qPCR Screening of Pathogens with a Wide Range of Loads

Ananthan Nambiar, Chao Pan, Vishal Rana +4

Pathogenic infections pose a significant threat to global health, affecting millions of people every year and presenting substantial challenges to healthcare systems worldwide. Eff…

q-bio.QM2021★ 9 cited

A cross-study analysis of drug response prediction in cancer cell lines

Fangfang Xia, Jonathan Allen, Prasanna Balaprakash +21

To enable personalized cancer treatment, machine learning models have been developed to predict drug response as a function of tumor and drug features. However, most algorithm deve…

q-bio.PE2021

Stochastic social behavior coupled to COVID-19 dynamics leads to waves, plateaus and an endemic state

Alexei V. Tkachenko, Sergei Maslov, Tong Wang +3

It is well recognized that population heterogeneity plays an important role in the spread of epidemics. While individual variations in social activity are often assumed to be persi…

physics.bio-ph2020

Ligation of random oligomers leads to emergence of autocatalytic sequence network

Patrick W. Kudella, Alexei V. Tkachenko, Sergei Maslov +1

The emergence of longer information-carrying and functional nucleotide polymers from random short strands was a major stepping stone at the dawn of life. But the formation of those…

q-bio.PE2020★ 107 cited

Time-dependent heterogeneity leads to transient suppression of the COVID-19 epidemic, not herd immunity

Alexei V. Tkachenko, Sergei Maslov, Ahmed Elbanna +3

Epidemics generally spread through a succession of waves that reflect factors on multiple timescales. On short timescales, super-spreading events lead to burstiness and overdispers…

q-bio.PE2020★ 30 cited

Modeling COVID-19 dynamics in Illinois under non-pharmaceutical interventions

George N. Wong, Zachary J. Weiner, Alexei V. Tkachenko +3

We present modeling of the COVID-19 epidemic in Illinois, USA, capturing the implementation of a Stay-at-Home order and scenarios for its eventual release. We use a non-Markovian a…