239 citations · 412 across the 24 of their papers we have counts for
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q-bio.PE2019
Global redistribution and local migration in semi-discrete host-parasitoid population dynamic models
Brooks Emerick, Abhyudai Singh
Host-parasitoid population dynamics is often probed using a semi-discrete/hybrid modeling framework. Here, the update functions in the discrete-time model connecting year-to-year c…
q-bio.MN2019
Network Inference in Systems Biology: Recent Developments, Challenges, and Applications
Michael M. Saint-Antoine, Abhyudai Singh
One of the most interesting, difficult, and potentially useful topics in computational biology is the inference of gene regulatory networks (GRNs) from expression data. Although re…
q-bio.MN2019
Evaluating Pruning Methods in Gene Network Inference
Michael M. Saint-Antoine, Abhyudai Singh
One challenge in gene network inference is distinguishing between direct and indirect regulation. Some algorithms, including ARACNE and Phixer, approach this problem by using pruni…