76 citations · 161 across the 17 of their papers we have counts for
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q-bio.QM2015
Quantifying Reticulation in Phylogenetic Complexes Using Homology
Kevin Emmett, Raul Rabadan
Reticulate evolutionary processes result in phylogenetic histories that cannot be modeled using a tree topology. Here, we apply methods from topological data analysis to molecular…
q-bio.GN2015
Multiscale Topology of Chromatin Folding
Kevin Emmett, Benjamin Schweinhart, Raul Rabadan
The three dimensional structure of DNA in the nucleus (chromatin) plays an important role in many cellular processes. Recent experimental advances have led to high-throughput metho…
q-bio.QM2015★ 76 cited
Inference of Ancestral Recombination Graphs through Topological Data Analysis
Pablo G. Camara, Arnold J. Levine, Raul Rabadan
The recent explosion of genomic data has underscored the need for interpretable and comprehensive analyses that can capture complex phylogenetic relationships within and across spe…