8 citations · 8 across the 2 of their papers we have counts for
2 papers
q-bio.GN2026
FASTR: Reimagining FASTQ via Compact Image-inspired Representation
Adrian Tkachenko, Sepehr Salem, Ayotomiwa Ezekiel Adeniyi +7
Motivation: High-throughput sequencing (HTS) enables population-scale genomics but generates massive datasets, creating bottlenecks in storage, transfer, and analysis. FASTQ, the s…
q-bio.GN2021★ 8 cited
GateKeeper-GPU: Fast and Accurate Pre-Alignment Filtering in Short Read Mapping
Zülal Bingöl, Mohammed Alser, Onur Mutlu +2
At the last step of short read mapping, the candidate locations of the reads on the reference genome are verified to compute their differences from the corresponding reference segm…