activity
20072021
most citedIntroducing Improved Structural Properties and Salt Dependence into a Coarse-Grained Model of DNA

423 citations · 877 across the 7 of their papers we have counts for

collaborators

10 papers

cond-mat.soft202123 cited

Phase behaviour of hard cylinders

Joyce T. Lopes, Flavio Romano, Eric Grelet +2

Using isobaric Monte Carlo simulations, we map out the entire phase diagram of a system of hard cylindrical particles of length and diameter , using an improved algorithm to…

cond-mat.soft2020

Measuring internal forces in single-stranded DNA: Application to a DNA force clamp

Megan C. Engel, Flavio Romano, Ard A. Louis +1

We present a new method for calculating internal forces in DNA structures using coarse-grained models and demonstrate its utility with the oxDNA model. The instantaneous forces on…

cond-mat.soft202047 cited

Designing patchy interactions to self-assemble arbitrary structures

Flavio Romano, John Russo, Lukáš Kroc +1

One of the fundamental goals of nanotechnology is to exploit selective and directional interactions between molecules to design particles that self-assemble into desired structures…

cond-mat.soft2018

Coarse-grained modelling of the structural properties of DNA origami

Benedict E. K. Snodin, John S. Schreck, Flavio Romano +2

We use the oxDNA coarse-grained model to provide a detailed characterization of the fundamental structural properties of DNA origamis, focussing on archetypal 2D and 3D origamis. T…

cond-mat.soft2018

How to Simulate Patchy Particles

Lorenzo Rovigatti, John Russo, Flavio Romano

Patchy particles is the name given to a large class of systems of mesoscopic particles characterized by a repulsive core and a discrete number of short-range and highly directional…

q-bio.BM201510 cited

Coarse-grained modelling of strong DNA bending I: Thermodynamics and comparison to an experimental "molecular vice"

Ryan M. Harrison, Flavio Romano, Thomas E. Ouldridge +2

DNA bending is biologically important for genome regulation and is relevant to a range of nanotechnological systems. Recent results suggest that sharp bending is much easier than i…