3 papers
physics.chem-ph2025
Socrates-Mol: Self-Oriented Cognitive Reasoning through Autonomous Trial-and-Error with Empirical-Bayesian Screening for Molecules
Xiangru Wang, Zekun Jiang, Heng Yang +4
Molecular property prediction is fundamental to chemical engineering applications such as solvent screening. We present Socrates-Mol, a framework that transforms language models in…
q-bio.GN2025
OmniGenBench: A Modular Platform for Reproducible Genomic Foundation Models Benchmarking
Heng Yang, Jack Cole, Yuan Li +3
The code of nature, embedded in DNA and RNA genomes since the origin of life, holds immense potential to impact both humans and ecosystems through genome modeling. Genomic Foundati…
q-bio.GN2024
OmniGenBench: Automating Large-scale in-silico Benchmarking for Genomic Foundation Models
Heng Yang, Jack Cole, Ke Li
The advancements in artificial intelligence in recent years, such as Large Language Models (LLMs), have fueled expectations for breakthroughs in genomic foundation models (GFMs). T…