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20242026
most citedDiffusion Generative Modeling for Spatially Resolved Gene Expression Inference from Histology Images

1 citations · 2 across the 21 of their papers we have counts for

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25 papers

cs.CL2026

Large Language Continuous Diffusion Models

Zhihan Yang, Wei Guo, Jean-Marie Lemercier +14

Despite the success of discrete diffusion language models (dLMs) for fast parallel decoding, their non-smooth, high-dimensional space hinders trajectory steering for reasoning and…

cs.CV2026

Scaling Reinforcement Learning for Diffusion Models via Velocity Matching

Jaemoo Choi, Wei Guo, Yuchen Zhu +4

Reward-based fine-tuning of diffusion models has largely inherited likelihood-based policy optimization developed for autoregressive large language models (LLMs). Diffusion models,…

cs.CV2026

Thinking with Anchors: Grounded and Efficient Document Reasoning

Sichen Zhu, Yuchen Zhu, Wenzhuo Xu +13

Existing document understanding benchmarks have largely focused on locating page elements, yet real-world document intelligence requires models to reason jointly about region seman…

cs.LG2026

A2D2: Fine-Tuning Any-Length Discrete Diffusion for Adaptive Decoding

Sophia Tang, Yuchen Zhu, Molei Tao +1

Discrete diffusion models offer a simple and stable likelihood-based framework for sequence generation, recently extended to any-length settings via token insertion. Principled rew…

cs.AI2026

Agents' Last Exam

Yiyou Sun, Xinyang Han, Weichen Zhang +355

Recent AI systems have achieved strong results on a wide range of benchmarks, yet these gains have not translated into economically meaningful deployment across many professional d…

cs.LG2026

FLARE: Diffusion for Hybrid Language Model

Yuchen Zhu, Jing Shi, Chongjian Ge +9

Autoregressive (AR) large language models (LLMs) have achieved broad practical success, but sequential decoding remains a key bottleneck for low-latency deployment. Recent efficien…

cond-mat.stat-mech2026

MetaDNS: Enhancing Exploration in Discrete Neural Samplers via Well-Tempered Metadynamics

Xiaochen Du, Juno Nam, Jaemoo Choi +7

Sampling from discrete distributions with multiple modes and energy barriers is fundamental to machine learning and computational physics. Recent discrete neural samplers like MDNS…

stat.ML2026

Discrete Adjoint Schrödinger Bridge Sampler

Wei Guo, Yuchen Zhu, Xiaochen Du +6

Learning discrete neural samplers is challenging due to the lack of gradients and combinatorial complexity. While stochastic optimal control (SOC) and Schrödinger bridge (SB) provi…

cs.CV2026

LaViDa-R1: Advancing Reasoning for Unified Multimodal Diffusion Language Models

Shufan Li, Yuchen Zhu, Jiuxiang Gu +6

Diffusion language models (dLLMs) recently emerged as a promising alternative to auto-regressive LLMs. The latest works further extended it to multimodal understanding and generati…

cs.LG2026

Rethinking the Design Space of Reinforcement Learning for Diffusion Models: On the Importance of Likelihood Estimation Beyond Loss Design

Jaemoo Choi, Yuchen Zhu, Wei Guo +6

Reinforcement learning has been widely applied to diffusion and flow models for visual tasks such as text-to-image generation. However, these tasks remain challenging because diffu…

cs.LG2026

Prism: Efficient Test-Time Scaling via Hierarchical Search and Self-Verification for Discrete Diffusion Language Models

Jinbin Bai, Yixuan Li, Yuchen Zhu +8

Inference-time compute has re-emerged as a practical way to improve LLM reasoning. Most test-time scaling (TTS) algorithms rely on autoregressive decoding, which is ill-suited to d…

cs.LG2025

From Masks to Worlds: A Hitchhiker's Guide to World Models

Jinbin Bai, Yu Lei, Hecong Wu +7

This is not a typical survey of world models; it is a guide for those who want to build worlds. We do not aim to catalog every paper that has ever mentioned a ``world model". Inste…

cs.LG2025

Improving Reasoning for Diffusion Language Models via Group Diffusion Policy Optimization

Kevin Rojas, Jiahe Lin, Kashif Rasul +4

Diffusion language models (DLMs) enable parallel, order-agnostic generation with iterative refinement, offering a flexible alternative to autoregressive large language models (LLMs…

cs.LG2025

Enhancing Reasoning for Diffusion LLMs via Distribution Matching Policy Optimization

Yuchen Zhu, Wei Guo, Jaemoo Choi +4

Diffusion large language models (dLLMs) are promising alternatives to autoregressive large language models (AR-LLMs), as they potentially allow higher inference throughput. Reinfor…

cs.LG2025

Proximal Diffusion Neural Sampler

Wei Guo, Jaemoo Choi, Yuchen Zhu +2

The task of learning a diffusion-based neural sampler for drawing samples from an unnormalized target distribution can be viewed as a stochastic optimal control problem on path mea…

cs.LG2025

TR2-D2: Tree Search Guided Trajectory-Aware Fine-Tuning for Discrete Diffusion

Sophia Tang, Yuchen Zhu, Molei Tao +1

Reinforcement learning with stochastic optimal control offers a promising framework for diffusion fine-tuning, where a pre-trained diffusion model is optimized to generate paths th…

cs.LG2025

MDNS: Masked Diffusion Neural Sampler via Stochastic Optimal Control

Yuchen Zhu, Wei Guo, Jaemoo Choi +3

We study the problem of learning a neural sampler to generate samples from discrete state spaces where the target probability mass function is known up to…

cs.LG2025

Diffuse Everything: Multimodal Diffusion Models on Arbitrary State Spaces

Kevin Rojas, Yuchen Zhu, Sichen Zhu +2

Diffusion models have demonstrated remarkable performance in generating unimodal data across various tasks, including image, video, and text generation. On the contrary, the joint…

cs.LG2025

Non-equilibrium Annealed Adjoint Sampler

Jaemoo Choi, Yongxin Chen, Molei Tao +1

Recently, there has been significant progress in learning-based diffusion samplers, which aim to sample from a given unnormalized density. Many of these approaches formulate the sa…

stat.ML2025

Complexity Analysis of Normalizing Constant Estimation: from Jarzynski Equality to Annealed Importance Sampling and beyond

Wei Guo, Molei Tao, Yongxin Chen

Given an unnormalized probability density , estimating its normalizing constant or free energy $F=-\lo…

cs.LG2025

Fast Solvers for Discrete Diffusion Models: Theory and Applications of High-Order Algorithms

Yinuo Ren, Haoxuan Chen, Yuchen Zhu +5

Discrete diffusion models have emerged as a powerful generative modeling framework for discrete data with successful applications spanning from text generation to image synthesis.…

cs.CV2025★ 1 cited

Diffusion Generative Modeling for Spatially Resolved Gene Expression Inference from Histology Images

Sichen Zhu, Yuchen Zhu, Molei Tao +1

Spatial Transcriptomics (ST) allows a high-resolution measurement of RNA sequence abundance by systematically connecting cell morphology depicted in Hematoxylin and Eosin (H&E) sta…

quant-ph2024★ 1 cited

Generative modeling assisted simulation of measurement-altered quantum criticality

Yuchen Zhu, Molei Tao, Yuebo Jin +1

In quantum many-body systems, measurements can induce qualitative new features, but their simulation is hindered by the exponential complexity involved in sampling the measurement…

cs.LG2024

Plug-and-Play Controllable Generation for Discrete Masked Models

Wei Guo, Yuchen Zhu, Molei Tao +1

This article makes discrete masked models for the generative modeling of discrete data controllable. The goal is to generate samples of a discrete random variable that adheres to a…