activity
20182023
most citedPublicly Available Clinical BERT Embeddings

732 citations · 1.1k across the 13 of their papers we have counts for

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12 papers · 1 filter

cs.CL2023★ 27 cited

Scaling Clinical Trial Matching Using Large Language Models: A Case Study in Oncology

Cliff Wong, Sheng Zhang, Yu Gu +8

Clinical trial matching is a key process in health delivery and discovery. In practice, it is plagued by overwhelming unstructured data and unscalable manual processing. In this pa…

cs.CL2023★ 16 cited

Distilling Large Language Models for Biomedical Knowledge Extraction: A Case Study on Adverse Drug Events

Yu Gu, Sheng Zhang, Naoto Usuyama +8

Large language models (LLMs), such as GPT-4, have demonstrated remarkable capabilities across a wide range of tasks, including health applications. In this paper, we study how LLMs…

cs.CL2023★ 20 cited

Self-Verification Improves Few-Shot Clinical Information Extraction

Zelalem Gero, Chandan Singh, Hao Cheng +4

Extracting patient information from unstructured text is a critical task in health decision-support and clinical research. Large language models (LLMs) have shown the potential to…

cs.CL2023

What are the Desired Characteristics of Calibration Sets? Identifying Correlates on Long Form Scientific Summarization

Griffin Adams, Bichlien H Nguyen, Jake Smith +7

Summarization models often generate text that is poorly calibrated to quality metrics because they are trained to maximize the likelihood of a single reference (MLE). To address th…

cs.CL2023

Diagnosing Transformers: Illuminating Feature Spaces for Clinical Decision-Making

Aliyah R. Hsu, Yeshwanth Cherapanamjeri, Briton Park +3

Pre-trained transformers are often fine-tuned to aid clinical decision-making using limited clinical notes. Model interpretability is crucial, especially in high-stakes domains lik…

cs.CL2023

Compositional Zero-Shot Domain Transfer with Text-to-Text Models

Fangyu Liu, Qianchu Liu, Shruthi Bannur +9

Label scarcity is a bottleneck for improving task performance in specialised domains. We propose a novel compositional transfer learning framework (DoT5 - domain compositional zero…