activity
20182022
most citedPublicly Available Clinical BERT Embeddings

732 citations · 750 across the 5 of their papers we have counts for

collaborators

14 papers

cs.CL20223 cited

Towards Structuring Real-World Data at Scale: Deep Learning for Extracting Key Oncology Information from Clinical Text with Patient-Level Supervision

Sam Preston, Mu Wei, Rajesh Rao +11

Objective: The majority of detailed patient information in real-world data (RWD) is only consistently available in free-text clinical documents. Manual curation is expensive and ti…

cs.CL2021

Modular Self-Supervision for Document-Level Relation Extraction

Sheng Zhang, Cliff Wong, Naoto Usuyama +3

Extracting relations across large text spans has been relatively underexplored in NLP, but it is particularly important for high-value domains such as biomedicine, where obtaining…

cs.IR202112 cited

Domain-Specific Pretraining for Vertical Search: Case Study on Biomedical Literature

Yu Wang, Jinchao Li, Tristan Naumann +12

Information overload is a prevalent challenge in many high-value domains. A prominent case in point is the explosion of the biomedical literature on COVID-19, which swelled to hund…

eess.AS20193 cited

Cross-Language Aphasia Detection using Optimal Transport Domain Adaptation

Aparna Balagopalan, Jekaterina Novikova, Matthew B. A. McDermott +3

Multi-language speech datasets are scarce and often have small sample sizes in the medical domain. Robust transfer of linguistic features across languages could improve rates of ea…

cs.LG2019

Feature Robustness in Non-stationary Health Records: Caveats to Deployable Model Performance in Common Clinical Machine Learning Tasks

Bret Nestor, Matthew B. A. McDermott, Willie Boag +5

When training clinical prediction models from electronic health records (EHRs), a key concern should be a model's ability to sustain performance over time when deployed, even as ca…

cs.LG2019

MIMIC-Extract: A Data Extraction, Preprocessing, and Representation Pipeline for MIMIC-III

Shirly Wang, Matthew B. A. McDermott, Geeticka Chauhan +3

Robust machine learning relies on access to data that can be used with standardized frameworks in important tasks and the ability to develop models whose performance can be reasona…