Structural Descriptors and Information Extraction from X-ray Emission Spectra: Aqueous Sulfuric Acid
arXiv:2402.08355 · doi:10.1039/D4CP02454K
Abstract
Machine learning can reveal new insights into X-ray spectroscopy of liquids when the local atomistic environment is presented to the model in a suitable way. Many unique structural descriptor families have been developed for this purpose. We benchmark the performance of six different descriptor families using a computational data set of 24200 sulfur K X-ray emission spectra of aqueous sulfuric acid simulated at six different concentrations. We train a feed-forward neural network to predict the spectra from the corresponding descriptor vectors and find that the local many-body tensor representation, smooth overlap of atomic positions and atom-centered symmetry functions excel in this comparison. We found a similar hierarchy when applying the emulator-based component analysis to identify and separate the spectrally relevant structural characteristics from the irrelevant ones. In this case, the spectra were dominantly dependent on the concentration of the system, whereas adding the second most significant degree of freedom in the decomposition allowed for distinction of the protonation state of the acid molecule.
References in corpus (21)
- Relativistic separable dual-space Gaussian Pseudopotentials from H to Rn
- CP2K: An Electronic Structure and Molecular Dynamics Software Package -- Quickstep: Efficient and Accurate Electronic Structure Calculations
- On representing chemical environments
- Fast and Accurate Modeling of Molecular Atomization Energies with Machine Learning
- A real-space grid implementation of the Projector Augmented Wave method
- A Spectral Analysis Method for Automated Generation of Quantum-Accurate Interatomic Potentials
- DScribe: Library of Descriptors for Machine Learning in Materials Science
- Unified Representation of Molecules and Crystals for Machine Learning
- Extending the Accuracy of the SNAP Interatomic Potential Form
- Representations of molecules and materials for interpolation of quantum-mechanical simulations via machine learning
- Updates to the DScribe Library: New Descriptors and Derivatives
- Tutorial: How to Train a Neural Network Potential
- Accurate computational prediction of core-electron binding energies in carbon-based materials: A machine-learning model combining density-functional theory and
- Sensitivity and Dimensionality of Atomic Environment Representations used for Machine Learning Interatomic Potentials
- Machine learning spectral indicators of topology
- Disentangling Structural Information From Core-level Excitation Spectra
- Kernel based quantum machine learning at record rate : Many-body distribution functionals as compact representations
- Towards Structural Reconstruction from X-Ray Spectra
- Emulator-based Decomposition for Structural Sensitivity of Core-level Spectra
- Machine learning in interpretation of electronic core-level spectra
- Information Bottleneck in Peptide Conformation Determination by X-ray Absorption Spectroscopy