Parameters estimation for spatio-temporal maximum entropy distributions: application to neural spike trains
arXiv:1404.3470 · doi:10.3390/e16042244
Abstract
We propose a numerical method to learn Maximum Entropy (MaxEnt) distributions with spatio-temporal constraints from experimental spike trains. This is an extension of two papers [10] and [4] who proposed the estimation of parameters where only spatial constraints were taken into account. The extension we propose allows to properly handle memory effects in spike statistics, for large sized neural networks.
34 pages, 33 figures
References in corpus (8)
- Weak pairwise correlations imply strongly correlated network states in a neural population
- Prediction of spatio-temporal patterns of neural activity from pairwise correlations
- The simplest maximum entropy model for collective behavior in a neural network
- Spin glass models for a network of real neurons
- Faster solutions of the inverse pairwise Ising problem
- Gibbs distribution analysis of temporal correlations structure in retina ganglion cells
- Spatio-temporal spike trains analysis for large scale networks using maximum entropy principle and Monte-Carlo method
- The Ising decoder: reading out the activity of large neural ensembles
Cited by in corpus (6)
- Inverse statistical problems: from the inverse Ising problem to data science
- Large Deviations Properties of Maximum Entropy Markov Chains from Spike Trains
- Inference of stochastic time series with missing data
- Maximum Entropy Principle Analysis in Network Systems with Short-time Recordings
- Thermodynamic Formalism in Neuronal Dynamics and Spike Train Statistics
- Information Entropy Production of Spatio-Temporal Maximum Entropy Distributions